Definition Methanospirillum hungatei JF-1 chromosome, complete genome.
Accession NC_007796
Length 3,544,738

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Identifier: 88601423

GI number:

Start: 120839

End: 122701

Strand: Direct

Name: Not Available

Synonym: Mhun_0104

Alternate gene names: NA

Gene position: NA

Preceding gene: 88601422

Following gene: 88601424

Centisome position: NA

GC content: NA

Gene sequence:

>1863_bases
ATGTCCCGGCTGCAGATTCAGGGGAAAATACCTTTTCAGGAGGCTGAGAGTCATGATACTGAAGAGTGTATACTAAACCC
TGAGTCCTGCGCCCTGTACCGGATGCTGCCCGCAAATGCCAAAGAGTATGCCCGGAACTATCCCCACCTTCTTGAATACC
TCCATATCTTCCCGGTAGATGAATTCGGAATCCCGTTATTCTTTTCTGAGCTGAAACGTGATTTGAAAGGGATTAAGGAT
CCGAATCTCATTTATCCTGCAAAACCTCCAATTTTCATTCATATCTTCTTTGATCCGAATGATGTCAGGAACTTTTACAT
CCCCATCGAACCATCGTTCATGCATAATATCGGCCGGTTGCTTCCGGCAATCGAGTACCGGCTGGTAGACCTGCTTGATG
CCCTGGAAGAAGACCCGGTTACTCCGGAAGAGCGGACAGCGGTATTAAAACGCCTGCTCAGACAGGTCATGTATATCAAG
AAAGCAGGAGAAGCAATTGATCCCAGCCTGCTGAAGATTGAAGGGCCGAAAGGATTTGGAGACAAGTTAAAATCATTCCT
TACCACTGATCTGACCGCCAAAGAAGAACCGGGTGCCGAGCGGCTTTTTGCAGATGTGCCCCATCTCTCTGACGGGCGTA
TCATAGTGAGTCCCCAGGAGTTTGAAGCGATTGAGTACCAGATGATCCGTGACAAAATCGATGTCGGACTTCTGTATCCG
TTTATCTCGGATAATTTTATTGAGGATATCACCTGTGACGGGCTTGGCCCCATATTTATCGAACACAAGATCTTCAAAGG
GCTCAAATCTGTCGTCGGTTTTGATCAGGAGGCTGCACTTGATGATTTCTGTATTAAGCTTGCAGAAAAATCGCGTCGCC
CGATTACGTACCGGAATCCAATCGTTGATGCGACCCTTCCGGACGGATCACGTATCAATATCGTCTATTCAACGGAGATC
AGCCGGCAGGGGAGTAACTTTACCATTCGTAAAGCGATGGATGATGTCATCTCCATCACCAAGCTGGTCGAATTTGGAAC
CTGTAGTTATGCACTTGCGGCATATCTCTGGATCTGCATTGAGAACGGAATGTCCCTTTTCATGTCCGGCGAGACGGCAT
CCGGCAAGACAACCTCAATGAATGCTCTTACAACCTTCATCTCCCCTGAGTCAAAGATCGTCAGTATCGAGGACACTCCG
GAACTTATCATCCCTCATAAAAACTGGACCCGTGAAGTATCCAAAGGAAAAGGAAAAGGTGAAGGTGAAGGTTCAGATGT
TACCATGTTCGATCTCCTTCGTGCTGCACTTCGTCAGCGTCCAAACATGATCATGGTCGGAGAGATCCGTGGAGTGGAAG
GAGCAGTCGCATTCGGTGCCATGCAGACCGGCCACCCGGTGATGAGTACATTCCACGCAGCAACGGTGGAGAAACTGATT
CAGCGTCTTACCGGTGACCCCATTCTTATCCCCAAGACCTTCATTGATAACCTCAACCTGGTGGTCATTCAAAGTGCAGT
CCGGCGGCCTGATGGAGCGATGGTCAGACGTCAGCTGAATGTTTCTGAACTGGTCGGATATGATGCACAAAGTGGAGGTT
TCTCCTTTGTTGAGGTCTTTACCTGGGACCCGGTCACTGATACGCACGAATTTACCGGTAAAGGTTCAAGCTATCTTCTG
GAAAACAAGATCGCAACCATGCTTGGTATTCCTGAGCATAAAAAGGCGCAAATGTACATGGAAGTAGAAAAACGTGCTAA
GATCCTGGAACGGCTTCATAAAGCAGGATATACTGACTTTATCGAACTCTTTCTGATGATAACAAAATTGAAAAAACAGG
GACTTCTCAATATCGATATCTGA

Upstream 100 bases:

>100_bases
TCAGAGGTGCCAGGAAGACTACTGGTAACCTTGTCAGCTTTGAAGTCCATCCCGGATATGGGATGAAGATTATTCCGGTA
TCAGTTGCAAAAGTCTGAAT

Downstream 100 bases:

>100_bases
TCCATGGCATTTGAGGGTTTTTTAGATAAACTGCGTGCGTCCAACCAGGGAAAATTACCCTTTGAGGATTTGTATGCGAC
GATTTATGCAAAACTCTACA

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>620_residues
MSRLQIQGKIPFQEAESHDTEECILNPESCALYRMLPANAKEYARNYPHLLEYLHIFPVDEFGIPLFFSELKRDLKGIKD
PNLIYPAKPPIFIHIFFDPNDVRNFYIPIEPSFMHNIGRLLPAIEYRLVDLLDALEEDPVTPEERTAVLKRLLRQVMYIK
KAGEAIDPSLLKIEGPKGFGDKLKSFLTTDLTAKEEPGAERLFADVPHLSDGRIIVSPQEFEAIEYQMIRDKIDVGLLYP
FISDNFIEDITCDGLGPIFIEHKIFKGLKSVVGFDQEAALDDFCIKLAEKSRRPITYRNPIVDATLPDGSRINIVYSTEI
SRQGSNFTIRKAMDDVISITKLVEFGTCSYALAAYLWICIENGMSLFMSGETASGKTTSMNALTTFISPESKIVSIEDTP
ELIIPHKNWTREVSKGKGKGEGEGSDVTMFDLLRAALRQRPNMIMVGEIRGVEGAVAFGAMQTGHPVMSTFHAATVEKLI
QRLTGDPILIPKTFIDNLNLVVIQSAVRRPDGAMVRRQLNVSELVGYDAQSGGFSFVEVFTWDPVTDTHEFTGKGSSYLL
ENKIATMLGIPEHKKAQMYMEVEKRAKILERLHKAGYTDFIELFLMITKLKKQGLLNIDI

Sequences:
NA

Specific function: NA

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA