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The map label for this gene is 88196541

Identifier: 88196541

GI number: 88196541

Start: 2679767

End: 2680354

Strand: Reverse

Name: 88196541

Synonym: SAOUHSC_02913

Alternate gene names: NA

Gene position: 2680354-2679767 (Counterclockwise)

Preceding gene: 88196542

Following gene: 88196539

Centisome position: 95.0

GC content: 30.44

Gene sequence:

>588_bases
ATGACTATAGATCGACGTATTAGAAAATCACAAGTTGCAATGAGAAATGCATTTATTGAACTTTTACATCAACACCAATT
AGAAGAGATTACTGTGCAACAAATTGCAGATTTAGCTGATGTTAACCGTAGTACATTTTATACGCATTATTATGATAAGT
ATGATTTGCTTGAAAAATTAGAGGACCAGCAGTTGGAGGAAATAAGAGACTTCATTCATGATGAGAAGTTAAATGGAGCA
GTTAAGTTATCCACGGATAACATACATCAAATTATGACCGTTTTAATAGAAATGATAGAAAAAGACATCGCATTTTATCA
ATTGATGTTTCGTATGGGTAAAGATTCAAATATCCACGAAAAACTTTATGATTTAATTATGTGTCATTTACAACGTTATA
AAAATGAAAATGATCAAATTAATGGTATACCATTTTCTTATTTCATGAGTTATGTTTCAGGTGCGGGATTGTCTTTTATA
AGACATTGGGTAGAAGATCCAAACCGTATAGACAAAGTTGACTTAATAAGGCATTTTAATACGATTGTCAATCAAGGGCC
AGCAACGATAATTAAAAATATACAATAA

Upstream 100 bases:

>100_bases
CTATATTAAACAGGTAAACATTGTGTGCCAATCATCAATGTTGGAGATTTGTGGGATAATGAACATAACGTTTATAATCA
TTGGGGAGGACTTGATATAA

Downstream 100 bases:

>100_bases
AATAAGGCAAGCCATGAATCGAGAGTGGCTTGCCTTGCTAAATAACATAAGCTTATTAAATGATATCTTTATCAATAACA
TTATTGTTGGATTGCAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGA
VKLSTDNIHQIMTVLIEMIEKDIAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSFI
RHWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ

Sequences:

>Translated_195_residues
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGA
VKLSTDNIHQIMTVLIEMIEKDIAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSFI
RHWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ
>Mature_194_residues
TIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGAV
KLSTDNIHQIMTVLIEMIEKDIAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSFIR
HWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23194; Mature: 23063

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EDQQLEEIRDFIHDEKLNGAVKLSTDNIHQIMTVLIEMIEKDIAFYQLMFRMGKDSNIHE
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSFIRHWVEDPNRIDKVDLIRHFN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
TIVNQGPATIIKNIQ
HHHHCCHHHHHHCCC
>Mature Secondary Structure 
TIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EDQQLEEIRDFIHDEKLNGAVKLSTDNIHQIMTVLIEMIEKDIAFYQLMFRMGKDSNIHE
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSFIRHWVEDPNRIDKVDLIRHFN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
TIVNQGPATIIKNIQ
HHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA