Click here to switch to the map view.

The map label for this gene is yvaC [H]

Identifier: 88196448

GI number: 88196448

Start: 2591843

End: 2593093

Strand: Reverse

Name: yvaC [H]

Synonym: SAOUHSC_02814

Alternate gene names: 88196448

Gene position: 2593093-2591843 (Counterclockwise)

Preceding gene: 88196449

Following gene: 88196447

Centisome position: 91.91

GC content: 33.25

Gene sequence:

>1251_bases
TTGACATCACTCATAAAAATCAATCGACTTAACTTAGACTTTTATAAAGGTGTAAGACAGGGACTGTTAATGATTATTCC
TGCAATAATCGGTTACTTATGTGGTAATTTCCAATTTGGATTATTAGTTGCAACCGGAACACTAGCCCATATTTATGTTT
TTAAAGGTCCGTCGCGATCTAAGCTGCGAACTGTAATAATTTGTAATTTAGCGTTTGCAATATGTATGATGCTTGGTACG
CTAACAGCCAAAACGCCACTCGTTTTTGGAATGACATTATTAATTGTTACGGTTATACCATTTTATATATTTACTGCCTT
AAAAATAGCTGGACCGTCATCGACATTCTTCATTGTGACATTCAGTCTACCCATTAACTTACCTATAGCTCCCGAAGAAG
CATTATATAGAGGCTTTGCGATTTTAGTAGGCGGTATACTTGCCACTATGATGGTGTTAATCACGATCGTATTTTCTAAA
AACAAAGCTGAAGAACAAGCAATTCAAAATGATTTTAAACTCATATCTAAGTTGTTACACACTTATAATGATAAATCTGC
TTTTTTACAAGTAGCAAAAACAGCGGTGGATAGTTTTAAAGCATCTGATAAATTATTAATCACTTCTACTTCAAGTAACG
ATAAATTAAGTAGACGTTTCCAAAAATTATTATTATTACACACATCTGCCCAAGGGATTTATTCTGAACTGTTAGAGTTG
AACGCTAAACAAATTCGACCATTGCCAGATGAGTTAATTGAAATGATGGATCATATCATTGCACAACTAGATAATAGTGA
GGAAAATGTAAGATATTGGCGAAAAGAAGTGACAGTAACAGAGGAATTTCAAAATTTATTCAACCATATATTGAAAATTG
ATGAAATGGTGCATGCAAATGAAGCGCGTATTGCGTATGAAGCAGACATGCGAAAACCTTTATATAGTAAACGCATTTAT
CAAAATTTAACATTAGACTCTATTGTTTTTAGAAATACATTGAGATATACAGCGATTATGATGATAGCGATATTTATTGC
GTTAATGTTTGATTTTGAAAAAGCATACTGGATACCGTTATTCTGCACATACAATATTACTAGGAACATCAACTATACAT
GCAATCGAGAGAGGTATGGCACGAGGTTTAGGTACTATTTTAGGTGTGTTAGTACTTTCAGTCATATTGTTGTTTTCAAT
ACCAACACCTGTTGCAGTAATTTTAATGGGCATTGCAGCATTGTTTACTGA

Upstream 100 bases:

>100_bases
CGTAATTAAAATTTATAGCAACAAATTCATTTTAACTATGCTAATAAAAAGATTATGGAAATATTTTGACAAGGAAAGGA
GAAGTCGAAATGACATCTTT

Downstream 100 bases:

>100_bases
AGCATTGGTGGGAGCAAATTATGCGATTGCAGTAGTTTTTATTACAATACAAGTTATTTTAATGAACGGATTAGCATCAC
AGAATTTAACAATTAACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MTSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGT
LTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSK
NKAEEQAIQNDFKLISKLLHTYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIY
QNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPLFCTYNITRNINYTCNRERYGTRFRYYFRCVSTFSHIVVFN
TNTCCSNFNGHCSIVY

Sequences:

>Translated_416_residues
MTSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGT
LTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSK
NKAEEQAIQNDFKLISKLLHTYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIY
QNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPLFCTYNITRNINYTCNRERYGTRFRYYFRCVSTFSHIVVFN
TNTCCSNFNGHCSIVY
>Mature_415_residues
TSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGTL
TAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKN
KAEEQAIQNDFKLISKLLHTYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELN
AKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIYQ
NLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPLFCTYNITRNINYTCNRERYGTRFRYYFRCVSTFSHIVVFNT
NTCCSNFNGHCSIVY

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 47646; Mature: 47515

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRS
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCC
KLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
FSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLH
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
HCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHAN
CHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPL
CCEEEEECHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
FCTYNITRNINYTCNRERYGTRFRYYFRCVSTFSHIVVFNTNTCCSNFNGHCSIVY
EEEEEEEECCCCEECCHHHCHHHHHHHHHHHHHCEEEEEECCHHHCCCCCCEEEEC
>Mature Secondary Structure 
TSLIKINRLNLDFYKGVRQGLLMIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRS
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCC
KLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVT
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
FSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLH
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLEL
HCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
NAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHAN
CHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPL
CCEEEEECHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
FCTYNITRNINYTCNRERYGTRFRYYFRCVSTFSHIVVFNTNTCCSNFNGHCSIVY
EEEEEEEECCCCEECCHHHCHHHHHHHHHHHHHCEEEEEECCHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]