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The map label for this gene is tcaA [H]

Identifier: 88196276

GI number: 88196276

Start: 2421820

End: 2423202

Strand: Reverse

Name: tcaA [H]

Synonym: SAOUHSC_02635

Alternate gene names: 88196276

Gene position: 2423202-2421820 (Counterclockwise)

Preceding gene: 88196277

Following gene: 88196275

Centisome position: 85.89

GC content: 31.38

Gene sequence:

>1383_bases
ATGAAATCTTGCCCGAAGTGCGGACAACAAGCACAAGATGATGTACAGATATGTACACAATGTGGACATAAATTTGATAG
TCGTCAAGCATTATATAGAAAGTCAACCGATGAAGATATACAAACTAATAACATCAAGATGAGAAAAATGGTGCCTTGGG
CAATTGGTTTTTTCATTTTAATCTTAATTATTATATTGTTCTTTTTACTAAGAAACTTCAATTCACCTGAAGCGCAAACT
AAAATATTAGTGAATGCGATTGAGAATAATGATAAACAAAAAGTAGCAACATTATTAAGTACTAAAGATAATAAAGTAGA
TTCTGAAGAAGCAAAAGTATACATTAACTATATCAAAGATGAAGTTGGGCTTAAGCAATTTGTCAGCGACCTTAAAAATA
CGGTACATAAATTGAATAAGAGTAAGACCAGCGTAGCTTCTTATATTCAAACCAGATCTGGTCAAAATATATTACGTGTA
AGTAAAAATGGCACACGTTATATCTTTTTCGATAATATGAGCTTTACTGCACCTACCAAGCAACCAATTGTTAAACCGAA
AGAAAAAACAAAATATGAGTTTAAATCTGGTGGTAAGAAAAAGATGGTTATAGCTGAAGCAAATAAAGTGACGCCAATAG
GTAATTTTATACCGGGGACATATAGAATTCCAGCTATGAAATCAACTGAGAACGGTGATTTTGCAGGCCATTTAAAATTT
GATTTTAGACAAAGTAATTCTGAAACGGTAGATGTTACTGAAGATTTTGAAGAAGCAAATATATCTGTAACTTTAAAAGG
CGATACAAAATTAAATGATAGTTCTAAAAAAGTAACTATAAATGACCATGAAATGGCATTTTCAAGTTCCAAAACGTATG
GTCCATATCCACAAAATAAAGATATTACCATTTCAGCTTCAGGTAAAGCGAAAGATAAAACATTTACAACACAGACGAAG
ACGATTAAAGCTAGCGATTTAAAATACAATACAGAGATAACTTTGAATTTTGACAGTGAAGATATCGAAGACTATGTTGA
AAAGAAAGAAAAAGAAGAAAACAGCTTGAAGAACAAATTGATAGAATTCTTTGCTGGATATTCTTTAGCGAATAATGCTG
CGTTTAATCAGTCGGATTTTGATTTTGTATCATCATATATAAAAAAAGGATCATCTTTTTATGATGATGTAAAGAAGCGT
GTATCTAAAGGAAGTTTAATGATGATTAGTTCACCACAAATTATAGATGCTGAAAAACATGGTGATAAGATTACCGCAAC
CGTAAGATTAATAAATGAAAACGGTAAGCAAGTAGATAAAGAATATGAGCTTGAACAAGGCTCGCAAGACCGCTTGCAAT
TAATCAAGACATCAGAAAAATAG

Upstream 100 bases:

>100_bases
TTCTTGGGATAATATTTGTAAAATAATAATGGTAAAATAATGAAATAATTTTTGTGATATACATATAACAATTGAAGAGG
AACAGAATTGAGGTGAAAGT

Downstream 100 bases:

>100_bases
AGTATAAAACTTAAATAAGATGCATGTGTCATGGAATACAAACAACATCCTTTCAAAGTATTTACAATTAGTGTGAATTA
CTTTGAAGGGATTGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNKDITISASGKAKDKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK

Sequences:

>Translated_460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNKDITISASGKAKDKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
>Mature_460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNKDITISASGKAKDKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK

Specific function: Unknown

COG id: COG4640

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tcaA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52115; Mature: 52115

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH
ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH
EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC
QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEE
DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNK
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHEECCCCCCCCCCCCC
DITISASGKAKDKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
CEEEEECCCCCCCEEEECCCEEEECCEEECEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC
GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH
ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH
EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC
QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEE
DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNK
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHEECCCCCCCCCCCCC
DITISASGKAKDKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
CEEEEECCCCCCCEEEECCCEEEECCEEECEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC
GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA