Click here to switch to the map view.

The map label for this gene is 88196213

Identifier: 88196213

GI number: 88196213

Start: 2358664

End: 2359407

Strand: Reverse

Name: 88196213

Synonym: SAOUHSC_02569

Alternate gene names: NA

Gene position: 2359407-2358664 (Counterclockwise)

Preceding gene: 88196214

Following gene: 88196212

Centisome position: 83.63

GC content: 28.23

Gene sequence:

>744_bases
ATGTCTAAATTTAAAGTTAAGCGTTTAACTGCACACATACTAATGTTGAAAGTCATTAATGATATGTTGAAATATTCATT
TCATCTCACTTTGACTCAAGTGAAACTATTAAATCTATTAGTTAAATATGATAATTCTGATTCCAATAGCGCTTCAATAG
ATAGTTTATTAAAAATGAAAGAAATCCAATCTAAGATGGCCCTTCTTCAAATGTTAAGTTATTTAAACAATCATCAATGG
CTATTGAAAGGAAGAGATCAAAGGGATCAACGTAAATTGACTATTTCGATTAATAAAATGCATATAGATAAAATAGAATA
TATGAATAATGAGCTTAGTGACTATATTGAACGTTATTTTGGTCAATATACATTTGATTTTAGTTGTGACTATGTATCGT
ATTTATTGTCGTCACAAGAATTATTGCGGAATCTAAAGTGTTATTTAAATATGTGTCAATTATCATTAGAAGAGTTATAC
GTTTTAGGAATATTAAATCTGCATAAAGGTCAATTGACGGTTAAAGAATTACAGGGTGAATTCCATCACCCGATATTTGC
GGTTAGCCCGATTTTAAAGTGTTTAATTTTGAAGGGATTAGTTAAAAAAGAGAGATGTGAATTAGATGAAAGGCGTGTTA
TTGTAACAATCAAGCGAGAAAAGTTTTCTAAAGTCACTATGCTTATTCAAGCATGTTATAATTATCTTGAAAAGGGAATA
CAAGTTAAGCTTAATAATAAATAG

Upstream 100 bases:

>100_bases
AGAAATATTTATGATCATTCATTAATGGTCTCAAGCAATAGTATTGTTCATTTGAAATATCATCTTGAGATATAGGCATG
GTTTAAGAGAGGTTTTAAAG

Downstream 100 bases:

>100_bases
TTAATCACTTGTATTTCATATACCTATGAAGAATAGTTTATAGTTTTAAGTGGGAGGGATATTATGATTTTAGATAATGT
GAATCCAAATGATTTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMKEIQSKMALLQMLSYLNNHQW
LLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYFGQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELY
VLGILNLHKGQLTVKELQGEFHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
QVKLNNK

Sequences:

>Translated_247_residues
MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMKEIQSKMALLQMLSYLNNHQW
LLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYFGQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELY
VLGILNLHKGQLTVKELQGEFHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
QVKLNNK
>Mature_246_residues
SKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMKEIQSKMALLQMLSYLNNHQWL
LKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYFGQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELYV
LGILNLHKGQLTVKELQGEFHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGIQ
VKLNNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29158; Mature: 29027

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYF
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
GQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELYVLGILNLHKGQLTVKELQGE
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCH
FHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCC
QVKLNNK
EEEECCC
>Mature Secondary Structure 
SKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYF
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
GQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELYVLGILNLHKGQLTVKELQGE
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCH
FHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCC
QVKLNNK
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA