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The map label for this gene is 88196128

Identifier: 88196128

GI number: 88196128

Start: 2297685

End: 2298782

Strand: Reverse

Name: 88196128

Synonym: SAOUHSC_02476

Alternate gene names: NA

Gene position: 2298782-2297685 (Counterclockwise)

Preceding gene: 88196129

Following gene: 88196127

Centisome position: 81.48

GC content: 27.78

Gene sequence:

>1098_bases
TTGAGAGGCGACCAACGAACACAGGGTGAAAAATCAAGAAAAGAAGGTGGAAAAATATTTGGATCAGGAAGTAGAGCACC
GATAGCTATATCTATTTTAGTTAAAGATGGAAGTTACAATCACGATATCTATTATAATGACATTGGTGAATATTTAACTA
GAGAGCAAAAATTAGATACTTTAATGAAACATCAATCAATTGTGAATTTGAAAAGTTTGAATGTTTTACCCGATAAAAAC
AATGATTGGATTAATCAACGAGACATAAACTATGAGAATTATTTACCAATGTATGATTCCAAGGATATTGAAAATTCTAT
ATATTTAGATCAATTTAATGGAGTAAATTCAGCAAGAGATAATTGGGTAACAAATTTTTCGAATGAAAAAGCATTAGTAA
ATGCAAAATTACTTGTAGATAACTATAATTCTGAAATAGATAGATTAATTGATATCTTAGATTCAAGAGAACGTATAAAT
TTAGTGAACAAAGATGAAACATTTATTAGTTGGACACGAGGACTTACCCAAAAATTTTCTAAAGGAAAAAATATTTCAAT
TAATCCAGAGAGAATTGTTAAATTTATGCATAGACCATTTACAAAAAAATGGATAGTGTACGACAAAAATATTATGGAAA
TGCCAAGTAGATATTATAATATAATGGAGAATACTGGACAGGTGATTTATATACAAGGACAGGGAATGAATAAAGAATTC
TCGGCTATGATCACGGACATATTACCTAATTTCCAATTTATTGGTAATGGCAAAGGCTTTGCTACATACAAAGGTAAAGA
TAGTTTGAGGCTTGTAGATAATATTTCTAATTCTTTTAAAAAGAAAATAAATCTTAATTCAGAAGAGATAGTATATTATA
TATATGCAATTTTGCATCATAAATATTATGTGAACAAATATTCAAGTGATTTGAGTAAAGGTTTTCCGCGAATACCGATA
TTAAAGGATGTATATGGATTTGTTGAAATTGGTAGGGAGTTAGTGGAATTACATTTAAATTATGAAAAACAACTCAATTG
GGATGGTGTAGAAATAATTTATAATAATATGAATCCGAATTATAAAGTTGAAAAATGA

Upstream 100 bases:

>100_bases
TATAGGATTTGTAACAAATGGATCATTTATTGATAGTCAAAGCACTGATGGATTTAGAAAAGTTTTATACGATGAATTTA
ACTATCTGTACATAATTAAT

Downstream 100 bases:

>100_bases
AGCACCCTAAAAAGGGCGTGTTGGATACAGTAATATACAATACCGATATTACAGTTACTAACATTCCAAATAAAGTATAT
AATTATATTGTGAATGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; Superfamily II DNA/RNA Helicase; Adenine Specific DNA Methyltransferase; Type III Restriction Protein Res Subunit; Type III Restriction Res Subunit; Helicase Domain Protein; Helicase Domain-Containing Protein; N-6 DNA Methylase; II DNA/RNA Helicase; ATP-Dependent RNA Helicase; Type II R-M System Protein; Endonuclease And Methylase LlaGI; Restriction- System LlaBIII; Restriction/; DNA Helicase Restriction Type III R Subunit

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MRGDQRTQGEKSRKEGGKIFGSGSRAPIAISILVKDGSYNHDIYYNDIGEYLTREQKLDTLMKHQSIVNLKSLNVLPDKN
NDWINQRDINYENYLPMYDSKDIENSIYLDQFNGVNSARDNWVTNFSNEKALVNAKLLVDNYNSEIDRLIDILDSRERIN
LVNKDETFISWTRGLTQKFSKGKNISINPERIVKFMHRPFTKKWIVYDKNIMEMPSRYYNIMENTGQVIYIQGQGMNKEF
SAMITDILPNFQFIGNGKGFATYKGKDSLRLVDNISNSFKKKINLNSEEIVYYIYAILHHKYYVNKYSSDLSKGFPRIPI
LKDVYGFVEIGRELVELHLNYEKQLNWDGVEIIYNNMNPNYKVEK

Sequences:

>Translated_365_residues
MRGDQRTQGEKSRKEGGKIFGSGSRAPIAISILVKDGSYNHDIYYNDIGEYLTREQKLDTLMKHQSIVNLKSLNVLPDKN
NDWINQRDINYENYLPMYDSKDIENSIYLDQFNGVNSARDNWVTNFSNEKALVNAKLLVDNYNSEIDRLIDILDSRERIN
LVNKDETFISWTRGLTQKFSKGKNISINPERIVKFMHRPFTKKWIVYDKNIMEMPSRYYNIMENTGQVIYIQGQGMNKEF
SAMITDILPNFQFIGNGKGFATYKGKDSLRLVDNISNSFKKKINLNSEEIVYYIYAILHHKYYVNKYSSDLSKGFPRIPI
LKDVYGFVEIGRELVELHLNYEKQLNWDGVEIIYNNMNPNYKVEK
>Mature_365_residues
MRGDQRTQGEKSRKEGGKIFGSGSRAPIAISILVKDGSYNHDIYYNDIGEYLTREQKLDTLMKHQSIVNLKSLNVLPDKN
NDWINQRDINYENYLPMYDSKDIENSIYLDQFNGVNSARDNWVTNFSNEKALVNAKLLVDNYNSEIDRLIDILDSRERIN
LVNKDETFISWTRGLTQKFSKGKNISINPERIVKFMHRPFTKKWIVYDKNIMEMPSRYYNIMENTGQVIYIQGQGMNKEF
SAMITDILPNFQFIGNGKGFATYKGKDSLRLVDNISNSFKKKINLNSEEIVYYIYAILHHKYYVNKYSSDLSKGFPRIPI
LKDVYGFVEIGRELVELHLNYEKQLNWDGVEIIYNNMNPNYKVEK

Specific function: Unknown

COG id: COG4889

COG function: function code R; Predicted helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42746; Mature: 42746

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDQRTQGEKSRKEGGKIFGSGSRAPIAISILVKDGSYNHDIYYNDIGEYLTREQKLDT
CCCCCCCCCHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHH
LMKHQSIVNLKSLNVLPDKNNDWINQRDINYENYLPMYDSKDIENSIYLDQFNGVNSARD
HHHHHHHHCHHHEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
NWVTNFSNEKALVNAKLLVDNYNSEIDRLIDILDSRERINLVNKDETFISWTRGLTQKFS
CCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHH
KGKNISINPERIVKFMHRPFTKKWIVYDKNIMEMPSRYYNIMENTGQVIYIQGQGMNKEF
CCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHCCCCEEEEECCCCCHHH
SAMITDILPNFQFIGNGKGFATYKGKDSLRLVDNISNSFKKKINLNSEEIVYYIYAILHH
HHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KYYVNKYSSDLSKGFPRIPILKDVYGFVEIGRELVELHLNYEKQLNWDGVEIIYNNMNPN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCC
YKVEK
EEECC
>Mature Secondary Structure
MRGDQRTQGEKSRKEGGKIFGSGSRAPIAISILVKDGSYNHDIYYNDIGEYLTREQKLDT
CCCCCCCCCHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHH
LMKHQSIVNLKSLNVLPDKNNDWINQRDINYENYLPMYDSKDIENSIYLDQFNGVNSARD
HHHHHHHHCHHHEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
NWVTNFSNEKALVNAKLLVDNYNSEIDRLIDILDSRERINLVNKDETFISWTRGLTQKFS
CCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHH
KGKNISINPERIVKFMHRPFTKKWIVYDKNIMEMPSRYYNIMENTGQVIYIQGQGMNKEF
CCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHCCCCEEEEECCCCCHHH
SAMITDILPNFQFIGNGKGFATYKGKDSLRLVDNISNSFKKKINLNSEEIVYYIYAILHH
HHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KYYVNKYSSDLSKGFPRIPILKDVYGFVEIGRELVELHLNYEKQLNWDGVEIIYNNMNPN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCC
YKVEK
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA