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The map label for this gene is 88196127

Identifier: 88196127

GI number: 88196127

Start: 2297395

End: 2297688

Strand: Reverse

Name: 88196127

Synonym: SAOUHSC_02475

Alternate gene names: NA

Gene position: 2297688-2297395 (Counterclockwise)

Preceding gene: 88196128

Following gene: 88196126

Centisome position: 81.44

GC content: 29.59

Gene sequence:

>294_bases
ATGAAGCACCCTAAAAAGGGCGTGTTGGATACAGTAATATACAATACCGATATTACAGTTACTAACATTCCAAATAAAGT
ATATAATTATATTGTGAATGGCAAGCCTGCTATTGAATGGATTATAGATCAGTACAACGTAAGCATCGACAAGAAATCTG
GAATATTAGATGATCCTAATGAATTTAGTGAAGATCCGAATTACATTTTAAATCTGCTTTTATCAGTTATTACTGTAAGT
ATGAAAACTCTTGGATTAATAGATAAATTACCAGATTTTGAAGTATTAGATTAA

Upstream 100 bases:

>100_bases
GGGAGTTAGTGGAATTACATTTAAATTATGAAAAACAACTCAATTGGGATGGTGTAGAAATAATTTATAATAATATGAAT
CCGAATTATAAAGTTGAAAA

Downstream 100 bases:

>100_bases
GGAGAGGATATATTGACAAATACTATCAAAAAAATAATTTATTTTGATGAACTATCAGCAATGGATTTATTACAGATAGA
GAAGAAAGGTAACCTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; Superfamily II DNA/RNA Helicase; Type III Restriction Res Subunit; Type III Restriction Protein Res Subunit; Helicase Domain-Containing Protein; Adenine Specific DNA Methyltransferase; Helicase Domain Protein; Endonuclease And Methylase LlaGI; ATP-Dependent RNA Helicase; Type II R-M System Protein; Restriction- System LlaBIII; Restriction/; DNA Helicase Restriction Type III R Subunit

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKHPKKGVLDTVIYNTDITVTNIPNKVYNYIVNGKPAIEWIIDQYNVSIDKKSGILDDPNEFSEDPNYILNLLLSVITVS
MKTLGLIDKLPDFEVLD

Sequences:

>Translated_97_residues
MKHPKKGVLDTVIYNTDITVTNIPNKVYNYIVNGKPAIEWIIDQYNVSIDKKSGILDDPNEFSEDPNYILNLLLSVITVS
MKTLGLIDKLPDFEVLD
>Mature_97_residues
MKHPKKGVLDTVIYNTDITVTNIPNKVYNYIVNGKPAIEWIIDQYNVSIDKKSGILDDPNEFSEDPNYILNLLLSVITVS
MKTLGLIDKLPDFEVLD

Specific function: Unknown

COG id: COG4889

COG function: function code R; Predicted helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10996; Mature: 10996

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHPKKGVLDTVIYNTDITVTNIPNKVYNYIVNGKPAIEWIIDQYNVSIDKKSGILDDPN
CCCCCCCCHHHEEECCCEEEEECCHHHHHHHCCCCCHHHHEEHHHCCEECCCCCCCCCCC
EFSEDPNYILNLLLSVITVSMKTLGLIDKLPDFEVLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKHPKKGVLDTVIYNTDITVTNIPNKVYNYIVNGKPAIEWIIDQYNVSIDKKSGILDDPN
CCCCCCCCHHHEEECCCEEEEECCHHHHHHHCCCCCHHHHEEHHHCCEECCCCCCCCCCC
EFSEDPNYILNLLLSVITVSMKTLGLIDKLPDFEVLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA