Click here to switch to the map view.

The map label for this gene is 88195968

Identifier: 88195968

GI number: 88195968

Start: 2134363

End: 2134653

Strand: Reverse

Name: 88195968

Synonym: SAOUHSC_02302

Alternate gene names: NA

Gene position: 2134653-2134363 (Counterclockwise)

Preceding gene: 88195969

Following gene: 88195967

Centisome position: 75.66

GC content: 34.02

Gene sequence:

>291_bases
GTGAATCATAATTATCCTTGCTTAAGCATTTGCTTTGTAAGGGAAGTGAGGAGGCAACTAATCGTGGAAGAATTTAAGCA
ACATTATAAGGGTTTAATTGATGAAAGTTTAACGTGCCAAGATAAAGTAGAATTGATAAAAAAGTGTGAGAAATACACTG
ACGAAGTGATTCGTAAGGACGTCTTGCCTGAAGACATTGTCGATATTCACAAAAACTATATATTGACGTTAAACTTAACG
CGTGAAGATGTGTTCAAGACATTAGATGTCTTACAAGAAATTTGGTTATAG

Upstream 100 bases:

>100_bases
TTAGGTATTCCATCCTAAAGTTTTTTTAGCTTAAAAGTATCATCTACAGCAAAATTGCAAACGACAAAATTGATAAGTGC
AATTAAATAAATGTTAGTAA

Downstream 100 bases:

>100_bases
TTATCGAGATTATCAAAGATTGGTAGATAAACTTCAAGTTCACGATAAAGAGATAGACTTAGCTTCTAGCTTACAACAAA
CAATGCTTAAAACAGATATT

Product: sigmaB regulation protein RsbU

Products: NA

Alternate protein names: Serine Phosphatase RsbU Regulator Of Sigma Subunit; Sigma Factor B Regulator Protein; SigmaB Regulation Protein RsbU

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNHNYPCLSICFVREVRRQLIVEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPEDIVDIHKNYILTLNLT
REDVFKTLDVLQEIWL

Sequences:

>Translated_96_residues
MNHNYPCLSICFVREVRRQLIVEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPEDIVDIHKNYILTLNLT
REDVFKTLDVLQEIWL
>Mature_96_residues
MNHNYPCLSICFVREVRRQLIVEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPEDIVDIHKNYILTLNLT
REDVFKTLDVLQEIWL

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11569; Mature: 11569

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHNYPCLSICFVREVRRQLIVEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VLPEDIVDIHKNYILTLNLTREDVFKTLDVLQEIWL
CCHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNHNYPCLSICFVREVRRQLIVEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VLPEDIVDIHKNYILTLNLTREDVFKTLDVLQEIWL
CCHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA