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The map label for this gene is ydaV [H]

Identifier: 88195890

GI number: 88195890

Start: 2063220

End: 2063999

Strand: Reverse

Name: ydaV [H]

Synonym: SAOUHSC_02216

Alternate gene names: 88195890

Gene position: 2063999-2063220 (Counterclockwise)

Preceding gene: 88195891

Following gene: 88195889

Centisome position: 73.16

GC content: 35.64

Gene sequence:

>780_bases
ATGAAACCACTATTCAGCGAAAAGATAAACGAAAGCTTGAAAAAATATCAACCTACTCATGTCGAAAAAGGATTGAAATG
TGAGAGATGTGGAAGTGAATACGACTTATATAAGTTTGCTCCTACTAAAAAACACCCGAATGGTTACGAGTATAAAGACG
GTTGCAAATGTGAAATCTATGAGGAATATAAGCGAAACAAGCAACGGAAGATAAACAACATATTCAATCAATCAAACGTT
AATCCGTCTTTAAGAGATGCAACAGTCAAAAACTACAAGCCACAAAATGAAAAACAAGTACACGCTAAACAAACAGCAAT
AGAGTACGTACAAGGCTTCTCTACAAAAGAACCAAAATCATTAATATTGCAAGGTTCATACGGAACTGGTAAAAGCCACC
TAGCATACGCTATCGCAAAAGCAGTCAAAGCTAAAGGGCATACGGTTGCTTTTATGCACATACCAATGTTGATGGATCGT
ATCAAAGCGACATACAACAAAAATGCAGTAGAGACTACAGACGAGTTAGTCAGATTGTTAAGCGATATTGATTTACTTGT
ACTAGATGATATGGGTGTAGAGAACACAGAACATACTTTAAACAAACTTTTCAGCATTGTTGATAACAGAGTAGGTAAAA
ACAACATCTTTACAACTAACTTTAGTGATAAAGAACTAAATCAAAATATGAACTGGCAACGTATCAATTCAAGAATGAAA
CACAATGCAAGAAAAGTAAGAGTAATCGGAGACGATTTCAGGGAGCGAGACGCATGGTAA

Upstream 100 bases:

>100_bases
TAAATTTGAGGGGTACCTCAATCAAAAAATACAACCAACTGGCACGGATCAATTGGAACGCATGAAGTACGACGAAAGTT
ATTGGGATTAGGGGGATATT

Downstream 100 bases:

>100_bases
CCAAAGAATTTTTGAAAATTAAACTTGAGTGTTCAGATATGTACGCTCAGAAACTCATAGACGAGGCACAGGGCGATGAA
AATAAGTTATATGACCTATT

Product: phage DnaC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKPLFSEKINESLKKYQPTHVEKGLKCERCGSEYDLYKFAPTKKHPNGYEYKDGCKCEIYEEYKRNKQRKINNIFNQSNV
NPSLRDATVKNYKPQNEKQVHAKQTAIEYVQGFSTKEPKSLILQGSYGTGKSHLAYAIAKAVKAKGHTVAFMHIPMLMDR
IKATYNKNAVETTDELVRLLSDIDLLVLDDMGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMK
HNARKVRVIGDDFRERDAW

Sequences:

>Translated_259_residues
MKPLFSEKINESLKKYQPTHVEKGLKCERCGSEYDLYKFAPTKKHPNGYEYKDGCKCEIYEEYKRNKQRKINNIFNQSNV
NPSLRDATVKNYKPQNEKQVHAKQTAIEYVQGFSTKEPKSLILQGSYGTGKSHLAYAIAKAVKAKGHTVAFMHIPMLMDR
IKATYNKNAVETTDELVRLLSDIDLLVLDDMGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMK
HNARKVRVIGDDFRERDAW
>Mature_259_residues
MKPLFSEKINESLKKYQPTHVEKGLKCERCGSEYDLYKFAPTKKHPNGYEYKDGCKCEIYEEYKRNKQRKINNIFNQSNV
NPSLRDATVKNYKPQNEKQVHAKQTAIEYVQGFSTKEPKSLILQGSYGTGKSHLAYAIAKAVKAKGHTVAFMHIPMLMDR
IKATYNKNAVETTDELVRLLSDIDLLVLDDMGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMK
HNARKVRVIGDDFRERDAW

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787623, Length=250, Percent_Identity=27.6, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1790823, Length=198, Percent_Identity=30.8080808080808, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 30059; Mature: 30059

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLFSEKINESLKKYQPTHVEKGLKCERCGSEYDLYKFAPTKKHPNGYEYKDGCKCEIY
CCCHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEHH
EEYKRNKQRKINNIFNQSNVNPSLRDATVKNYKPQNEKQVHAKQTAIEYVQGFSTKEPKS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LILQGSYGTGKSHLAYAIAKAVKAKGHTVAFMHIPMLMDRIKATYNKNAVETTDELVRLL
EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SDIDLLVLDDMGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMK
HCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCHHHHHHHHH
HNARKVRVIGDDFRERDAW
CCCCEEEEECCHHHCCCCC
>Mature Secondary Structure
MKPLFSEKINESLKKYQPTHVEKGLKCERCGSEYDLYKFAPTKKHPNGYEYKDGCKCEIY
CCCHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEHH
EEYKRNKQRKINNIFNQSNVNPSLRDATVKNYKPQNEKQVHAKQTAIEYVQGFSTKEPKS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LILQGSYGTGKSHLAYAIAKAVKAKGHTVAFMHIPMLMDRIKATYNKNAVETTDELVRLL
EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SDIDLLVLDDMGVENTEHTLNKLFSIVDNRVGKNNIFTTNFSDKELNQNMNWQRINSRMK
HCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCHHHHHHHHH
HNARKVRVIGDDFRERDAW
CCCCEEEEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]