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The map label for this gene is 88195869

Identifier: 88195869

GI number: 88195869

Start: 2053915

End: 2055105

Strand: Reverse

Name: 88195869

Synonym: SAOUHSC_02194

Alternate gene names: NA

Gene position: 2055105-2053915 (Counterclockwise)

Preceding gene: 88195870

Following gene: 88195868

Centisome position: 72.84

GC content: 34.01

Gene sequence:

>1191_bases
ATGATGGTTCAAACTTTGCCAGGTTTTCAAGGAACAAAATTACGACAATATAAAGATATAGAAGCAATTAGGCATAGCGA
CATCTTTACGGCAGTTATGATGATTGCTTCTGATTTGGCGCGCATGCCAATTAGGGTGACAGTGAACGGCCAAATTAATT
ATAGTGACAGGATTGTTAATTTGTTAAATACACGTCCTAACCCAATGTATAACGGCTATATATTCAAATTAGTAGTGTTT
GTTAGTGCCTTACTAACATCGCACGGCTATATTGAAATTACACGTGATAAAACAGGAGAACCTATGAATTTAACGTTCAG
AAAGACATCCGAAATAGAATTGAAATCAGACGCAAGAGGTCGACTGTATTATTTTCATCAAAGGATAGACAGTAACGGAA
ATAATATAGAACGTAATGTTAAGTTTGAGGATATGCTAGACATCAAATTTTATTCGTTGGATGGTATAAATGGTTTGTCA
CTGTTAGACACATTAAGTCGCACGATAGAATCAGATAACAATGGAAAAGATTTCCTTAATAATTTCTTGCGAAATGGCAC
ACATGCTGGTGGTATTTTGAAAATGAAAGGTGTATTAGATAATAAAAAAGCAAGAGACCGTGCCAGAGAAGAATTTCACA
AAAGTTTTAGTGGAACTAAACAAGCTGGGAAAGTTGTCGTACTCGATGAATCAATGACGTTTGATCAATTAGAAGTTGAT
ACAGAAGTTTTAAAGCTTATCAGAGAAAACAAATCATCAACAAGAGAAATAGCAGGTGTATTTGGTATTCCATTGCATAA
GTTCGGCATAGAAACAGCGAACATGAGTATCACGGATGCTAATTTAGATTACTTATCAACTTTAAAACCTTATATTACAT
GCGTTTGTGCAGAATTGAATTTTAAGTTTAATGATGAATATGTGAATCGTGAATTTAAATTTGATACCACTGAAATACGA
GTTGTTGATGAAAAAACACAAGCTGAAATTGACAAAATTAACATTGATTCTGGAAAGATGAATATCGATGAAATTAGACA
ACGTGATGGATTAGCGCCAATACCAGGCGGTAATGGTAGCATTCACAGAGTCGATTTAAACCATGTAAATATTGAACTTG
TAGATGAGTATCAGATGAATAAATCGAGAGCTACTGATAAAAAATTGAAAGGTGGTGAGGAAAATGAGTAA

Upstream 100 bases:

>100_bases
TTTTAAATCACGAAAGCAATCAAGAAAGGAGTTAGTAGTTGTGGGGATTTTTTATAAAAATGAAAAACGAGACTTGCAAT
ACAACGAAGATGATTTGCAA

Downstream 100 bases:

>100_bases
GGAAACGAGAGTTGGCAACATTATTGAGGTACGCTCAAATGATAACAACGAAATGGTCATAGAGGGGTATGCGTTAAAGT
TTGACACTTGGTCTGAAAAT

Product: HK97 family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINYSDRIVNLLNTRPNPMYNGYIFKLVVF
VSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIERNVKFEDMLDIKFYSLDGINGLS
LLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVD
TEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDYLSTLKPYITCVCAELNFKFNDEYVNREFKFDTTEIR
VVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVDEYQMNKSRATDKKLKGGEENE

Sequences:

>Translated_396_residues
MMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINYSDRIVNLLNTRPNPMYNGYIFKLVVF
VSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIERNVKFEDMLDIKFYSLDGINGLS
LLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVD
TEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDYLSTLKPYITCVCAELNFKFNDEYVNREFKFDTTEIR
VVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVDEYQMNKSRATDKKLKGGEENE
>Mature_396_residues
MMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINYSDRIVNLLNTRPNPMYNGYIFKLVVF
VSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIERNVKFEDMLDIKFYSLDGINGLS
LLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVD
TEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDYLSTLKPYITCVCAELNFKFNDEYVNREFKFDTTEIR
VVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVDEYQMNKSRATDKKLKGGEENE

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 45105; Mature: 45105

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINYSDRIVN
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEECHHHHHHH
LLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARG
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCC
RLYYFHQRIDSNGNNIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLN
CEEEEEEECCCCCCCCEECCCHHHEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH
NFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVD
HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCEEEEEECCCCCHHHHHH
TEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDYLSTLKPYITCVCAELN
HHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHEEEEEECC
FKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGS
CEECHHHCCCEEEECCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCC
IHRVDLNHVNIELVDEYQMNKSRATDKKLKGGEENE
EEEEEECEEEEEEEECHHCCCHHCCHHHHCCCCCCC
>Mature Secondary Structure
MMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINYSDRIVN
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEECHHHHHHH
LLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARG
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCC
RLYYFHQRIDSNGNNIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLN
CEEEEEEECCCCCCCCEECCCHHHEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH
NFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSGTKQAGKVVVLDESMTFDQLEVD
HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCEEEEEECCCCCHHHHHH
TEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDYLSTLKPYITCVCAELN
HHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHEEEEEECC
FKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGS
CEECHHHCCCEEEECCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCC
IHRVDLNHVNIELVDEYQMNKSRATDKKLKGGEENE
EEEEEECEEEEEEEECHHCCCHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA