Click here to switch to the map view.

The map label for this gene is 88195854

Identifier: 88195854

GI number: 88195854

Start: 2038270

End: 2038557

Strand: Reverse

Name: 88195854

Synonym: SAOUHSC_02178

Alternate gene names: NA

Gene position: 2038557-2038270 (Counterclockwise)

Preceding gene: 88195855

Following gene: 88195853

Centisome position: 72.25

GC content: 30.9

Gene sequence:

>288_bases
ATGGCAAAAGAAATTATCAACAATACAGAAAGGTTTATTTTAGTACAAATCGACAAAGAAGGTACAGAACGTGTAGTATA
TCAAGATTTCACAGGAAGTTTTACAACTTCTGAAATGGTTAACCATGCTCAAGATTTTAAATCTGAAGAAAACGCTAAGA
AAATTGCGGAGACGTTAAATTTGTTATATCAATTAACTAACAAAAAACAACGTGTGAAAGTAGTTAAAGAAGTAGTTGAA
AGATCAGATTTATCTCCAGAGGTAACAGTTAACACTGAAACAGTATGA

Upstream 100 bases:

>100_bases
AAAGCGTATATACAAGAAAATAAAGAAAATCAACAATGTGCTGAGGAAGAGTAATCCTTAGCACTATTTTTATACAAAAA
TTTAAGGAGGTCATTTAATT

Downstream 100 bases:

>100_bases
AAAGCTATGAGTTAGATACTCATAATCTTTATTCTTTTAGAAAGCGGGTGTACTGAATTGGGGTGGTTCAAAAAACACGA
ACATGAATGGCGCATCAGAA

Product: phi PVL orf 22-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDFKSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVE
RSDLSPEVTVNTETV

Sequences:

>Translated_95_residues
MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDFKSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVE
RSDLSPEVTVNTETV
>Mature_94_residues
AKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDFKSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVER
SDLSPEVTVNTETV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10936; Mature: 10805

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDFKSEENAKKIAETLN
CCCHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
LLYQLTNKKQRVKVVKEVVERSDLSPEVTVNTETV
HHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCC
>Mature Secondary Structure 
AKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDFKSEENAKKIAETLN
CCHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
LLYQLTNKKQRVKVVKEVVERSDLSPEVTVNTETV
HHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA