Click here to switch to the map view.

The map label for this gene is 88195766

Identifier: 88195766

GI number: 88195766

Start: 1963032

End: 1963250

Strand: Reverse

Name: 88195766

Synonym: SAOUHSC_02083

Alternate gene names: NA

Gene position: 1963250-1963032 (Counterclockwise)

Preceding gene: 88195771

Following gene: 88195765

Centisome position: 69.59

GC content: 28.77

Gene sequence:

>219_bases
ATGCAATGGAATTTAATAAAGTTGAGAAAAGAAAGAAAGTGTACTCAAGAAGATTTAGCAAACCTCTTGAATATATCAAC
TGAAGGTTATCGTTTAAAAGAATTAGGAAAGCATCAATTTAAGAATGATGAGATGTTTATTATCGCTGATTTTTTTGACG
AAAATATTGGAGATATTTTTTTACCCACAAAGTACACGAAACGCAAACAAACATCTTAA

Upstream 100 bases:

>100_bases
TTTTTGGTATTCAACAAAAAAATACACGAAAAGCAAACTTTTATGTTGACTCAAGTACACGTATCGTGTATAGTAGGTTT
TGTAAGCGGGAGGTGACAAC

Downstream 100 bases:

>100_bases
AGGAGACATAACAAATGCAAGACCAATCATTAAAATTAGTAAAACTACAACTAAAATATCATAACCTTTCAGGACAAATT
GAAGCTTATGATAAATCACT

Product: bacteriophage L54a, Cro-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MQWNLIKLRKERKCTQEDLANLLNISTEGYRLKELGKHQFKNDEMFIIADFFDENIGDIFLPTKYTKRKQTS

Sequences:

>Translated_72_residues
MQWNLIKLRKERKCTQEDLANLLNISTEGYRLKELGKHQFKNDEMFIIADFFDENIGDIFLPTKYTKRKQTS
>Mature_72_residues
MQWNLIKLRKERKCTQEDLANLLNISTEGYRLKELGKHQFKNDEMFIIADFFDENIGDIFLPTKYTKRKQTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8655; Mature: 8655

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWNLIKLRKERKCTQEDLANLLNISTEGYRLKELGKHQFKNDEMFIIADFFDENIGDIF
CCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHHCCCCCCEEEEEECCCCCCCCEE
LPTKYTKRKQTS
CCCCCCCCCCCC
>Mature Secondary Structure
MQWNLIKLRKERKCTQEDLANLLNISTEGYRLKELGKHQFKNDEMFIIADFFDENIGDIF
CCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHHCCCCCCEEEEEECCCCCCCCEE
LPTKYTKRKQTS
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA