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The map label for this gene is 88195578

Identifier: 88195578

GI number: 88195578

Start: 1795589

End: 1796080

Strand: Reverse

Name: 88195578

Synonym: SAOUHSC_01881

Alternate gene names: NA

Gene position: 1796080-1795589 (Counterclockwise)

Preceding gene: 88195579

Following gene: 88195577

Centisome position: 63.66

GC content: 30.49

Gene sequence:

>492_bases
ATGTATAAAAATTATAACATGACCCCAACTTACACTACCAATAGAAACTTCGTTAGAATTCCTCAAAATGATATTTCGCG
ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGTGCAACATCCTATC
ATCCAAAAATGATGTTAAAAATCATCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT
CATGACAGTATTCGAATGATGTGGTTAGCCCAAGATCAAACACTTTCTTATAAAACTATTAATCGTTTTAGAGTGAATCC
TAATACTGATGCGTTAATTGAATCTTTATTTATTCAGTTCTATAGTCAATGTTTAAAGCAAAATCTTATTGATGATAATT
CAATTTTTATTGATGGTACAAAAGTAGAAGCTAGTGCCAATAGATATACATTGGTGCGGAAGAAAGTATTCAAAATCACG
AATCGAAATTGA

Upstream 100 bases:

>100_bases
ACTTGCACATAAATGTAAAATTCAATAAAATGAATTTTCTGTGTTGGGTCCCTTCGTATAATTTAATAAATACTACTAAA
CTAAATTAAAGAGGTGCCTT

Downstream 100 bases:

>100_bases
ACGAGAATTCAAAAACACTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGATGGAGATAGCGAT
TTAACAATAGAAGAAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase Is4 Family Protein; Transposase IS4 Family; ISPsy6 Transposase; Truncated; IS4 Family Transposase; Transposase Is4 Family; Transposase ; ISNCY Family Transposase; Transposase For IS; ISCpe5 Transposase

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MYKNYNMTPTYTTNRNFVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL
HDSIRMMWLAQDQTLSYKTINRFRVNPNTDALIESLFIQFYSQCLKQNLIDDNSIFIDGTKVEASANRYTLVRKKVFKIT
NRN

Sequences:

>Translated_163_residues
MYKNYNMTPTYTTNRNFVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL
HDSIRMMWLAQDQTLSYKTINRFRVNPNTDALIESLFIQFYSQCLKQNLIDDNSIFIDGTKVEASANRYTLVRKKVFKIT
NRN
>Mature_163_residues
MYKNYNMTPTYTTNRNFVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL
HDSIRMMWLAQDQTLSYKTINRFRVNPNTDALIESLFIQFYSQCLKQNLIDDNSIFIDGTKVEASANRYTLVRKKVFKIT
NRN

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19437; Mature: 19437

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKNYNMTPTYTTNRNFVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLK
CCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHH
IILYAYTQSVFSGRRIEKLLHDSIRMMWLAQDQTLSYKTINRFRVNPNTDALIESLFIQF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCHHHHEEEECCCCHHHHHHHHHHHH
YSQCLKQNLIDDNSIFIDGTKVEASANRYTLVRKKVFKITNRN
HHHHHHHHCCCCCCEEEECCEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYKNYNMTPTYTTNRNFVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLK
CCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHH
IILYAYTQSVFSGRRIEKLLHDSIRMMWLAQDQTLSYKTINRFRVNPNTDALIESLFIQF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCHHHHEEEECCCCHHHHHHHHHHHH
YSQCLKQNLIDDNSIFIDGTKVEASANRYTLVRKKVFKITNRN
HHHHHHHHCCCCCCEEEECCEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA