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The map label for this gene is yrvM [H]

Identifier: 88195439

GI number: 88195439

Start: 1638074

End: 1638847

Strand: Reverse

Name: yrvM [H]

Synonym: SAOUHSC_01735

Alternate gene names: 88195439

Gene position: 1638847-1638074 (Counterclockwise)

Preceding gene: 88195440

Following gene: 88195437

Centisome position: 58.09

GC content: 32.95

Gene sequence:

>774_bases
ATGAAACATCAATTTTCAAGAAATGAACTAGCGATTGGACAACAAGGTTTAGATTTATTGAAGCAACAAACTGTTGTCAT
ACTTGGCGTTGGAGGTGTTGGTTCATTTGCTGCTGAAGCATTAGCAAGAACGAATATTGGTCATATTATATTAATAGATA
AAGATGATGTTGATATTACAAATGTAAACAGACAATTACACGCTTTAACTACAACGGTAGGACAAAGTAAAGTTTCTTTG
ATGGAAGAACGTATTAAATTAATTAATCCAGATTGTAAAGTCACGCCCTTACATATGTTTTATACAGAAGAGACATATGA
AGAAATTTTCGATAACTACGATATAGATTATTTTGTAGATGCAAGTGATACAATAATGTACAAAGTACACTTAATGAAAG
AGTGTCTTGACCGAGGGATTAAAGTGATTTCCAGTATGGGTGCTGCAAATAAAACAGATCCAACACGTTTTACAATTTCA
GATATCTCTAAAACACATACCGATCCAATGGCCAAAATTATTCGTCAAAAATTGAAAAAACTAGGAATTCGTAAAGGGAT
TCCAGTTGTATTTTCAGATGAAAGTCCAATTGTCATAAGAGAAGATGTAAAAGATATAGTTGGAGATAAAAATGCTATCA
ATCGAAAAGGACAAATGCCACCTTCTTCAAATGCCTTTGTGCCAAGTGTTGTTGGATTAATTTGTGCAAGTTATGTGGTG
AATGACGTATTAAAAGATATTCCAGTTCGTCGCATTAAAGACAAAGGGCAATAA

Upstream 100 bases:

>100_bases
TCCTCGTTGAATTTTGGGAAAATAATCAAAGTGATAATGCTAAATATAAAATTTTAAGTTACTATGTACTTATGTATAAA
TCAGTGAAAGAGGTAAAATA

Downstream 100 bases:

>100_bases
TTCATTTTGAAAGGGATAATTTTCAACGTAAGGCAAGTGTAACCACACCATAAAACTAAAACTGACTAGTTCGCAAGCAT
AGTAGAATATGCCTCGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALARTNIGHIILIDKDDVDITNVNRQLHALTTTVGQSKVSL
MEERIKLINPDCKVTPLHMFYTEETYEEIFDNYDIDYFVDASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTIS
DISKTHTDPMAKIIRQKLKKLGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQMPPSSNAFVPSVVGLICASYVV
NDVLKDIPVRRIKDKGQ

Sequences:

>Translated_257_residues
MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALARTNIGHIILIDKDDVDITNVNRQLHALTTTVGQSKVSL
MEERIKLINPDCKVTPLHMFYTEETYEEIFDNYDIDYFVDASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTIS
DISKTHTDPMAKIIRQKLKKLGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQMPPSSNAFVPSVVGLICASYVV
NDVLKDIPVRRIKDKGQ
>Mature_257_residues
MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALARTNIGHIILIDKDDVDITNVNRQLHALTTTVGQSKVSL
MEERIKLINPDCKVTPLHMFYTEETYEEIFDNYDIDYFVDASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTIS
DISKTHTDPMAKIIRQKLKKLGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQMPPSSNAFVPSVVGLICASYVV
NDVLKDIPVRRIKDKGQ

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=209, Percent_Identity=38.2775119617225, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1787048, Length=146, Percent_Identity=28.0821917808219, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082356, Length=133, Percent_Identity=30.0751879699248, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321790, Length=249, Percent_Identity=32.5301204819277, Blast_Score=135, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6322825, Length=200, Percent_Identity=39, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24660640, Length=133, Percent_Identity=30.0751879699248, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28642; Mature: 28642

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALARTNIGHIILIDKDDVDIT
CCCCCCCCCHHCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCH
NVNRQLHALTTTVGQSKVSLMEERIKLINPDCKVTPLHMFYTEETYEEIFDNYDIDYFVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCCCEEEEC
ASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTISDISKTHTDPMAKIIRQKLKK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCHHHHHHHHHHHH
LGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQMPPSSNAFVPSVVGLICASYVV
CCHHCCCCEEECCCCCEEEHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NDVLKDIPVRRIKDKGQ
HHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALARTNIGHIILIDKDDVDIT
CCCCCCCCCHHCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCH
NVNRQLHALTTTVGQSKVSLMEERIKLINPDCKVTPLHMFYTEETYEEIFDNYDIDYFVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHCCCCCEEEEC
ASDTIMYKVHLMKECLDRGIKVISSMGAANKTDPTRFTISDISKTHTDPMAKIIRQKLKK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCHHHHHHHHHHHH
LGIRKGIPVVFSDESPIVIREDVKDIVGDKNAINRKGQMPPSSNAFVPSVVGLICASYVV
CCHHCCCCEEECCCCCEEEHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NDVLKDIPVRRIKDKGQ
HHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]