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The map label for this gene is yrrO [H]

Identifier: 88195421

GI number: 88195421

Start: 1621052

End: 1622320

Strand: Reverse

Name: yrrO [H]

Synonym: SAOUHSC_01716

Alternate gene names: 88195421

Gene position: 1622320-1621052 (Counterclockwise)

Preceding gene: 88195422

Following gene: 88195420

Centisome position: 57.5

GC content: 35.46

Gene sequence:

>1269_bases
ATGAAGACAATAGAAGAGATTAAATCAACTCCTAAAACAGTTATGAAGAAACCAGAATTATTAGCACCTGCTGGAAACTT
AGAAAAGTTAAAAATAGCAGTACATTATGGCGCTGATGCCGTATTTTTAGGTGGTCAAGAATATGGATTACGTTCAAATG
CTGATAATTTCACGATGGAAGAAATAGCTGAAGGTGTTGAATTTGCGAACCGTTACGGTGCCAAAATTTATGTTACGACA
AATATTATTGCACATGATGAGAATATTGAAGGTCTAGAATCATATTTGCGTAATTTGGAAAAGACTGGTGCGACAGGTAT
CATTGTTGCAGATCCTTTAATTATCGAAACATGTAAAGAAGTTGCGCCAAAACTTGAAATTCATTTATCTACTCAACAAT
CACTTTCTAATTACAAAGCTGTAGAATATTGGAAAGAAGAAGGATTGGATCGTGTTGTATTAGCACGTGAGACCGGCGCG
ATGGAAATGCGTGAAATGAAGGAAAAAGTAGATATTGAAATCGAAGCATTTATTCATGGTGCTATGTGTATCGCCTATTC
AGGTAGATGTACATTAAGTAATCATATGACTGCAAGGGATTCCAACAGAGGCGGTTGCTGTCAAAGTTGCCGTTGGGATT
ATGAATTATTAGAAGTTGATGATAATGGTGAACTTGATGTTTTTTATAATCAAGGTGAAGTTACACCGTTTGCGATGAGT
CCTAAAGATTTAAAATTAATCGAATCAATTCCTCAAATGATGGATATTGGTGTGGACTCATTAAAAATTGAAGGACGTAT
GAAGTCAATTCATTATATTGCAACAGTTGTCTCAGTATATCGTAAAGTCATTGATGCGTATGCGGCAGATCCTGACAACT
TTAAGATTAATCCGGAATGGTTAATAGAGTTAGATAAATGTGCAAATAGAGACACTGCACCAGCATTCTTTGAGGGAACA
CCTGGTTATGAAGAACAGATGTTTGGTCAACAACAATCTAAAAAATCACCATTTGATTTTTGTGGTTTGGTATTAGACTA
TAATGAAGATACAAAAATTGCGACTATTCAACAACGAAATAACTTTAAACCAGGTCAAGAAATAGAATTCTTTGGTCCAG
AAATTGAAACATTTACACAAGTAGTAGAAGCAATTTATGATGAAGAAGGTAACAGCTTAGACGCGGCGCGCCATCCATTA
CAAATCGTTCAAATTAAAGTGGATCGCCCGATATATCCAAACAACATGATGAGAAAGGAAATTGGCTAA

Upstream 100 bases:

>100_bases
AATTTATGTTGATGGATCCAATTGAAGAAATTCAACCTGATCATCGACCATTTGACGAAGGTTTCTTATATAAACAAACA
GTATATTAAGGAGGTTAATC

Downstream 100 bases:

>100_bases
TGAAAGCTACTACAATCATTGGCATAGCTGGTGGATCTGGCTCAGGAAAAACAACTGTAACTAACGAAATTATGAAAAAC
TTAGAAGGTCATAGTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTT
NIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA
MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS
PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGT
PGYEEQMFGQQQSKKSPFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPL
QIVQIKVDRPIYPNNMMRKEIG

Sequences:

>Translated_422_residues
MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTT
NIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA
MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS
PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGT
PGYEEQMFGQQQSKKSPFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPL
QIVQIKVDRPIYPNNMMRKEIG
>Mature_422_residues
MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTMEEIAEGVEFANRYGAKIYVTT
NIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKEVAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGA
MEMREMKEKVDIEIEAFIHGAMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS
PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEWLIELDKCANRDTAPAFFEGT
PGYEEQMFGQQQSKKSPFDFCGLVLDYNEDTKIATIQQRNNFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPL
QIVQIKVDRPIYPNNMMRKEIG

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=403, Percent_Identity=33.2506203473945, Blast_Score=211, Evalue=8e-56,
Organism=Escherichia coli, GI87081910, Length=268, Percent_Identity=39.9253731343284, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1789548, Length=311, Percent_Identity=30.8681672025724, Blast_Score=152, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47656; Mature: 47656

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTME
CCCHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCHH
EIAEGVEFANRYGAKIYVTTNIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKE
HHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH
VAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGAMEMREMKEKVDIEIEAFIHG
HCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEEHEEEE
AMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS
EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC
PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEW
CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH
LIELDKCANRDTAPAFFEGTPGYEEQMFGQQQSKKSPFDFCGLVLDYNEDTKIATIQQRN
EEEEHHHCCCCCCCCEECCCCCHHHHHHCHHHCCCCCCHHEEEEEEECCCCEEEEEECCC
NFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPLQIVQIKVDRPIYPNNMMRKE
CCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHH
IG
CC
>Mature Secondary Structure
MKTIEEIKSTPKTVMKKPELLAPAGNLEKLKIAVHYGADAVFLGGQEYGLRSNADNFTME
CCCHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCHH
EIAEGVEFANRYGAKIYVTTNIIAHDENIEGLESYLRNLEKTGATGIIVADPLIIETCKE
HHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH
VAPKLEIHLSTQQSLSNYKAVEYWKEEGLDRVVLARETGAMEMREMKEKVDIEIEAFIHG
HCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEEHEEEE
AMCIAYSGRCTLSNHMTARDSNRGGCCQSCRWDYELLEVDDNGELDVFYNQGEVTPFAMS
EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC
PKDLKLIESIPQMMDIGVDSLKIEGRMKSIHYIATVVSVYRKVIDAYAADPDNFKINPEW
CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHH
LIELDKCANRDTAPAFFEGTPGYEEQMFGQQQSKKSPFDFCGLVLDYNEDTKIATIQQRN
EEEEHHHCCCCCCCCEECCCCCHHHHHHCHHHCCCCCCHHEEEEEEECCCCEEEEEECCC
NFKPGQEIEFFGPEIETFTQVVEAIYDEEGNSLDAARHPLQIVQIKVDRPIYPNNMMRKE
CCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHH
IG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]