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The map label for this gene is 88195238

Identifier: 88195238

GI number: 88195238

Start: 1472483

End: 1473307

Strand: Reverse

Name: 88195238

Synonym: SAOUHSC_01524

Alternate gene names: NA

Gene position: 1473307-1472483 (Counterclockwise)

Preceding gene: 88195239

Following gene: 88195237

Centisome position: 52.22

GC content: 30.67

Gene sequence:

>825_bases
ATGCAATCTTTTGTAAAAATCATAGATGGTTACAAGGAAGAAGTAATAACAGATTTTAATCAGCTTATATTTTTAGATGC
AAGGGCTGAAAGTCCAAACACCAATGATAACAGTGTAACTATTAACGGAGTAGATGGTATTTTACCGGGCGCAATTAGTT
TTGCGCCTTTTTCATTAGTATTAAGGTTTGGCTATGATGGTATAGATGTTATAGATTTAAATTTATTTGAGCATTGGTTT
AGATCTGTGTTTAATCGCAGACATCCTTATTATGTTATTACTTCTCAAATGCCTGGTGTTAAATATGCAGTGAATACAGC
TAATGTTACATCTAATTTAAAAGATGGTTCTTCAACTGAAATTGAAGTAAGTTTAAATGTTTATAAAGGGTATTCTGAAT
CAGTTAATTGGACCGATAGCGAGTTCTTATTCGACTCTAATTGGATGTTTGAAAATGGAATTCCTCTTGATTTCACACCT
AAATATACTCATACATCAAATCAATTTACTATTTGGAACGGTTCTACTGATACGATAAATCCACGATTCAAGCACGATTT
GAAAATATTAATTAATTTAAATGCGAGTGGAGGATTTGAACTGGTTAATTATACAACAGGTGATATTTTTAAGTACAACA
AAAGTATAGATAAAAACACTGATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAACAGAGTGGGAATTGATACA
AATAGAGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTCAGTGATATTAAAACTACATT
TAAGTTTCCTTTTATTTATAGGTAG

Upstream 100 bases:

>100_bases
TAGGTTCTAATGATGCAATTAGAGGTTTAGAAAAAATATTGTCAAAACAAAGTGGGCATAGAGCAAATGCAAATAATTAT
ATGGGAGGTTTGACTAATTA

Downstream 100 bases:

>100_bases
GTGATTTAATGGATTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGATGTAGAT
TACGGTTCTTTTAAAGAATA

Product: holin-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWF
RSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTP
KYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR

Sequences:

>Translated_274_residues
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWF
RSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTP
KYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
>Mature_274_residues
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLVLRFGYDGIDVIDLNLFEHWF
RSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTEIEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTP
KYTHTSNQFTIWNGSTDTINPRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31190; Mature: 31190

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
CCHHHHHHCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
EEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCE
IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
EEEEEEEEECCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCC
PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
CCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCEEEECEEHEECCCEECCCC
NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
CCCEEEECCCCCCEEEECCHHHHHEEEECCEEEC
>Mature Secondary Structure
MQSFVKIIDGYKEEVITDFNQLIFLDARAESPNTNDNSVTINGVDGILPGAISFAPFSLV
CCHHHHHHCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH
LRFGYDGIDVIDLNLFEHWFRSVFNRRHPYYVITSQMPGVKYAVNTANVTSNLKDGSSTE
EEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCE
IEVSLNVYKGYSESVNWTDSEFLFDSNWMFENGIPLDFTPKYTHTSNQFTIWNGSTDTIN
EEEEEEEEECCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCC
PRFKHDLKILINLNASGGFELVNYTTGDIFKYNKSIDKNTDFVLDGVYAYRDINRVGIDT
CCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCEEEECEEHEECCCEECCCC
NRGIITLAPGKNEFKIKGDVSDIKTTFKFPFIYR
CCCEEEECCCCCCEEEECCHHHHHEEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA