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The map label for this gene is ywoC [H]

Identifier: 88193964

GI number: 88193964

Start: 164125

End: 164622

Strand: Reverse

Name: ywoC [H]

Synonym: SAOUHSC_00152

Alternate gene names: 88193964

Gene position: 164622-164125 (Counterclockwise)

Preceding gene: 88193965

Following gene: 88193963

Centisome position: 5.83

GC content: 35.74

Gene sequence:

>498_bases
ATGGATTATGCCCCATATACAGCTGAAAATGTCGTTCAAAACGCTAATAAATTAATAGATGTTTTTAGAAAAAACAATGG
CTTTATCGCTTTTGTTCGCGTGAATTTCTATGATGGTAAAGATGTATTGCAACCAAATGTAATGATCTCATTACCACCAA
AAGAAGGCGACGACTACAGTCGTTTCCATCATTTATTAGACAAGAGAGATGACGATTTTGTCATAGACAAACGACATTTT
AGTGCATTTGTAGGAACAGATTTGGACTTACAATTGCGACGTCGAGGAATTGATACGATTGTTCTTGGTGGTGTCGCAAC
GCATATTGGCGTAGATACGACAGCGCGAGATGCCTATCAATTAAACTACAATCAGTTTTTTGTTACAGATATGATGAGTG
CACAAAACGAAACGCTACATCAATTTCCAATAGATAATGTATTCCCATTGATGGGACAAACAATAACTACAAACGACTTT
CTAAATATATTGAACTAA

Upstream 100 bases:

>100_bases
AAGCGAATACTTTATTAAACGAATAGGACTCTGATATAAGATGATTAATTTTAATAAAACCGCTTTAGTGTTAATCGACC
TGCAAGAAGGTATTCTTAAA

Downstream 100 bases:

>100_bases
ACATATACTTCCCCCCTTCGATCATGTTGAGGGGGATCTTTATTTCACAAAGTATTAATACGTCGGGTTGTCTAACCTTC
TATATTTAACATATTCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNVMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHF
SAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
LNILN

Sequences:

>Translated_165_residues
MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNVMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHF
SAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
LNILN
>Mature_165_residues
MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNVMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHF
SAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
LNILN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=162, Percent_Identity=38.8888888888889, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016291
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 18924; Mature: 18924

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNVMISLPPKEGDDYS
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCHHH
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQ
HHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEEEECCCHHHCCCCCCCCCEEE
LNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDFLNILN
ECCCEEEEEHHHHCCCCCHHHCCCCCHHHHCCCEECCHHHHHHCC
>Mature Secondary Structure
MDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNVMISLPPKEGDDYS
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCHHH
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQ
HHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEEEECCCHHHCCCCCCCCCEEE
LNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDFLNILN
ECCCEEEEEHHHHCCCCCHHHCCCCCHHHHCCCEECCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]