| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87201198
Identifier: 87201198
GI number: 87201198
Start: 3407063
End: 3407347
Strand: Direct
Name: 87201198
Synonym: Saro_3186
Alternate gene names: NA
Gene position: 3407063-3407347 (Clockwise)
Preceding gene: 87201197
Following gene: 87201200
Centisome position: 95.66
GC content: 66.32
Gene sequence:
>285_bases ATGAAGGGAATTTTCAAGGGTGCCATGATGGCCTCCGTCGTCGCATTGGGCCTTGGCCTTGCGGCTTGCGACAGCAAGCA GGAGAACGCCGCAGAGGACACCGCCGACGCCGTCCGTGATGCCACCGACGCCACCGCCGACGCCATCGACGACGCTGCCG GCAAGGCCAGCGGCGAAGCAGCCGATGCGATGAACGACAAGGCGGACGCCATCCGCGGCGCTGGCGAAACCAAGGCCGAC GCCATGGAAGACCAGGCCGACAAGGCAGACAAGACCCCGGGCTGA
Upstream 100 bases:
>100_bases GTCGCGGTTCGGTTCGCTGAGCTTCTTTCCAAAATCCATGACCTACCAACAGAGGGCGGCCCGCAAGGACCGCCCTCACC TTGACCAGAAGGGGACTGCC
Downstream 100 bases:
>100_bases TCCCGCGGTCACGATCTCCGGGCCGTCACCGCGGCCTGGCTCGTCCCGTACCGGCTGGCAGCCATCCGGTCACGGAACCG AAAACCCGGCGGAGCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MKGIFKGAMMASVVALGLGLAACDSKQENAAEDTADAVRDATDATADAIDDAAGKASGEAADAMNDKADAIRGAGETKAD AMEDQADKADKTPG
Sequences:
>Translated_94_residues MKGIFKGAMMASVVALGLGLAACDSKQENAAEDTADAVRDATDATADAIDDAAGKASGEAADAMNDKADAIRGAGETKAD AMEDQADKADKTPG >Mature_94_residues MKGIFKGAMMASVVALGLGLAACDSKQENAAEDTADAVRDATDATADAIDDAAGKASGEAADAMNDKADAIRGAGETKAD AMEDQADKADKTPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9320; Mature: 9320
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIFKGAMMASVVALGLGLAACDSKQENAAEDTADAVRDATDATADAIDDAAGKASGEA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ADAMNDKADAIRGAGETKADAMEDQADKADKTPG HHHHCHHHHHHHCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKGIFKGAMMASVVALGLGLAACDSKQENAAEDTADAVRDATDATADAIDDAAGKASGEA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH ADAMNDKADAIRGAGETKADAMEDQADKADKTPG HHHHCHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA