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The map label for this gene is nodN [H]

Identifier: 87201192

GI number: 87201192

Start: 3401412

End: 3401873

Strand: Direct

Name: nodN [H]

Synonym: Saro_3180

Alternate gene names: 87201192

Gene position: 3401412-3401873 (Clockwise)

Preceding gene: 87201191

Following gene: 87201193

Centisome position: 95.5

GC content: 62.34

Gene sequence:

>462_bases
ATGACCAGGTTCATCCCCGCCGAGCAGGTCAAGGAGATGGTCGGGCAGGTTGTCGGCACATCGAAGTGGGTCGAGATCAC
GCAGGAGCGGGTCAACAAGTTCGCCGAGGCGACCGGGGACTTCCAGTTCATCCACGTCGACCCCGAGAAGGCGAAGCTCA
CCCCGTTTGGCGGGCCGATTGCACACGGGTTCCTGACGCTCTCGCTGATCCCGTTGCTGACCATGGAAAGCGACTGCCCG
CGCCCCGAACATATCAAGATGGGCGTGAACTACGGCGGCAACCGCACTCGCTTTCTCGCGCCGGTGCGCGTCGGCAAGCG
CGTGCGCGGAGTATTCAAGCTGCTCGAGATGGAAGAGAAGCGCCCCGGCCAGTGGCAGCAGACGATGGAAATCACCGTCG
AGATCGAGGGCGAGGACAAGCCCGCGCTGATGTGCGAATGGATCACCCAGTTCTTTGTCTGA

Upstream 100 bases:

>100_bases
CCGGTGACGGCACCCGCTTAATCATTCACTTAACTTCACTTGCACGGTCGCCGGCTTGCCGCCATGGTGCGCCGGAATTT
GCAAGAGGAGAGTGCAAGCA

Downstream 100 bases:

>100_bases
ACCCGGGAGGGGAAGCTTGAGGAAGAGGACTTCGGATCAGGCGCGGGGCCTGGCGCTCTGCGTGGCGGCGATCTGCGCAA
TCGGCCTGCCGGGCCTGGCG

Product: MaoC-like dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTRFIPAEQVKEMVGQVVGTSKWVEITQERVNKFAEATGDFQFIHVDPEKAKLTPFGGPIAHGFLTLSLIPLLTMESDCP
RPEHIKMGVNYGGNRTRFLAPVRVGKRVRGVFKLLEMEEKRPGQWQQTMEITVEIEGEDKPALMCEWITQFFV

Sequences:

>Translated_153_residues
MTRFIPAEQVKEMVGQVVGTSKWVEITQERVNKFAEATGDFQFIHVDPEKAKLTPFGGPIAHGFLTLSLIPLLTMESDCP
RPEHIKMGVNYGGNRTRFLAPVRVGKRVRGVFKLLEMEEKRPGQWQQTMEITVEIEGEDKPALMCEWITQFFV
>Mature_152_residues
TRFIPAEQVKEMVGQVVGTSKWVEITQERVNKFAEATGDFQFIHVDPEKAKLTPFGGPIAHGFLTLSLIPLLTMESDCPR
PEHIKMGVNYGGNRTRFLAPVRVGKRVRGVFKLLEMEEKRPGQWQQTMEITVEIEGEDKPALMCEWITQFFV

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To the R.leguminosarum biovar viciae counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17451; Mature: 17319

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFIPAEQVKEMVGQVVGTSKWVEITQERVNKFAEATGDFQFIHVDPEKAKLTPFGGPI
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCHH
AHGFLTLSLIPLLTMESDCPRPEHIKMGVNYGGNRTRFLAPVRVGKRVRGVFKLLEMEEK
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
RPGQWQQTMEITVEIEGEDKPALMCEWITQFFV
CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TRFIPAEQVKEMVGQVVGTSKWVEITQERVNKFAEATGDFQFIHVDPEKAKLTPFGGPI
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCHH
AHGFLTLSLIPLLTMESDCPRPEHIKMGVNYGGNRTRFLAPVRVGKRVRGVFKLLEMEEK
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
RPGQWQQTMEITVEIEGEDKPALMCEWITQFFV
CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]