| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201126
Identifier: 87201126
GI number: 87201126
Start: 3328116
End: 3328772
Strand: Reverse
Name: 87201126
Synonym: Saro_3114
Alternate gene names: NA
Gene position: 3328772-3328116 (Counterclockwise)
Preceding gene: 87201128
Following gene: 87201125
Centisome position: 93.46
GC content: 65.3
Gene sequence:
>657_bases TTGCGCCCGGCTCCCTGCCGCGCGATCCTTGCGCCGATGCTGACCCTCTATCATTGCCACAACGCCCGCTCCTTCCGCGC TTTATGGGCGATCGAGGAGATGGGCCTGCCCTATGATCTCCATGTCCTACCGTTCCCGCCGCGCAAGCGACACGAGGGCA TGCACGCAATCAACCCGCTCGGCACGATCCCGGTCCTTTACGATGGCGATGCGATGCTGACCGAGAGCGTTGCCATCCCG CATTACCTCGCGACGCGGTACGGTCCCACCGATCTCGCCGTCGCGCCTGATGAACCGGGCTACGCCGCCTATCTCAACTT TCTCGTGATGGGCGAGGCGACGCTGACCTTTCCGCAGACGATCCACCTGCGCTACGCGGTTTTCGCGCGGGGCGACGAGC GCCGCCCCGAAATTGCGCGGGATTACGCCGAATGGTTCGGCTCGCGCCTGCGCAATGCCGAAACCCTGATGGGCGCGGAC TATGCTGCCGCCGGTCGCTTCACCATGGCCGACATTTCGGTCGGGTACGCGATAATGCTCGCTCTCTCGGTCGGACTGGA CGAATTCGTGTCCGGTGCCATGCGCGCCTATTTCGCGCGCCTCGGGCAACGGCCCGCTTTCCAGCGCGCGATTGCCGCGC AGGGATCGCCGGCCTAA
Upstream 100 bases:
>100_bases CTGCCCGAACCACCTCTTGCCGCCCAGTATCGAAAAATGGCTATCGAAAAATGGCTATCGAAGAATGGTCGCGCTGGTGC CATCTGCCAAGACAGGCAGG
Downstream 100 bases:
>100_bases GCCGGGGCATGGCCCTCATCCTGTTCAACAAGCCCTATGGCGTGCTCTGCCAGTTCACCGACGAACGCACCGGTCCGCCC CGGCCGACGCTTGCGGACCA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase III; Glutathione S-Transferase Protein; Glutathione Transferase; Glutathione S-Transferase N-Terminal Domain; Glutathione S Transferase; Gst Protein; Glutatione S-Transferase
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MRPAPCRAILAPMLTLYHCHNARSFRALWAIEEMGLPYDLHVLPFPPRKRHEGMHAINPLGTIPVLYDGDAMLTESVAIP HYLATRYGPTDLAVAPDEPGYAAYLNFLVMGEATLTFPQTIHLRYAVFARGDERRPEIARDYAEWFGSRLRNAETLMGAD YAAAGRFTMADISVGYAIMLALSVGLDEFVSGAMRAYFARLGQRPAFQRAIAAQGSPA
Sequences:
>Translated_218_residues MRPAPCRAILAPMLTLYHCHNARSFRALWAIEEMGLPYDLHVLPFPPRKRHEGMHAINPLGTIPVLYDGDAMLTESVAIP HYLATRYGPTDLAVAPDEPGYAAYLNFLVMGEATLTFPQTIHLRYAVFARGDERRPEIARDYAEWFGSRLRNAETLMGAD YAAAGRFTMADISVGYAIMLALSVGLDEFVSGAMRAYFARLGQRPAFQRAIAAQGSPA >Mature_218_residues MRPAPCRAILAPMLTLYHCHNARSFRALWAIEEMGLPYDLHVLPFPPRKRHEGMHAINPLGTIPVLYDGDAMLTESVAIP HYLATRYGPTDLAVAPDEPGYAAYLNFLVMGEATLTFPQTIHLRYAVFARGDERRPEIARDYAEWFGSRLRNAETLMGAD YAAAGRFTMADISVGYAIMLALSVGLDEFVSGAMRAYFARLGQRPAFQRAIAAQGSPA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24120; Mature: 24120
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAPCRAILAPMLTLYHCHNARSFRALWAIEEMGLPYDLHVLPFPPRKRHEGMHAINPL CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCC GTIPVLYDGDAMLTESVAIPHYLATRYGPTDLAVAPDEPGYAAYLNFLVMGEATLTFPQT CCCCEEECCCHHHHHHHCCCHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCEECCCCE IHLRYAVFARGDERRPEIARDYAEWFGSRLRNAETLMGADYAAAGRFTMADISVGYAIML EEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCEEEEHHHHHHHHHH ALSVGLDEFVSGAMRAYFARLGQRPAFQRAIAAQGSPA HHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MRPAPCRAILAPMLTLYHCHNARSFRALWAIEEMGLPYDLHVLPFPPRKRHEGMHAINPL CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCC GTIPVLYDGDAMLTESVAIPHYLATRYGPTDLAVAPDEPGYAAYLNFLVMGEATLTFPQT CCCCEEECCCHHHHHHHCCCHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCEECCCCE IHLRYAVFARGDERRPEIARDYAEWFGSRLRNAETLMGADYAAAGRFTMADISVGYAIML EEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCEEEEHHHHHHHHHH ALSVGLDEFVSGAMRAYFARLGQRPAFQRAIAAQGSPA HHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA