Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201098

Identifier: 87201098

GI number: 87201098

Start: 3306108

End: 3306593

Strand: Reverse

Name: 87201098

Synonym: Saro_3086

Alternate gene names: NA

Gene position: 3306593-3306108 (Counterclockwise)

Preceding gene: 87201101

Following gene: 87201096

Centisome position: 92.84

GC content: 53.91

Gene sequence:

>486_bases
ATGAAAAATATCGTGAAATTCGCACTGGCTGCTCTCTTGGCCACCGGCCAAGGCTCCGTTTTCGCTCAGAACGGCCACAC
CGTCTACGCCGAAAGGCACTCGAGAGATGTCTGGATTGAACGGGTGAGCGACGATCTCTCCGACAATCTGGGGTATCCAA
ACACGCCAACATCAGGTTTCGCGTCAGTAAGGTTTGAATGCGGCCCTGACGGAAATCCAACGAATATTGTTGTCATCAAT
CACAGCAACAGTCGATTTGATGCGCCGTCGGTTCGTGCAGTACATTTGCTGCGTAACCTGCATCCGCTACCGGATAATGT
AGTTCGGGGGCAGGTATTCCAAGCCAATCTCATCTTTGCGACGAATGAATACGAGCTCACTCGACAAGCCCGCCTGCTTC
AGCAGGCCGAAGCCACGCGTCTTGCGAGCTCACACGCTGAGCAAACCGTCTTGGTGCTCAGTTCAAGTGCCAGAGGTCCC
GGCTGA

Upstream 100 bases:

>100_bases
GCCCTCCTGATCGGCTTTCGTTGCAATCGCAAATATAACGGTCGCAATTCGTGCGGGTGCCTCAGCATGGCCGATCCTTC
TTACTCAGGAGGCAGGCGCT

Downstream 100 bases:

>100_bases
AACAAGTCGGAACGCGCGAGGTCATGCCGTGCCTTTGCTCTGCGGGCGAAGGGCGGCGTGGCCTCGCGTCTCCGATTGGA
ATGACCCGGTCAAGGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKNIVKFALAALLATGQGSVFAQNGHTVYAERHSRDVWIERVSDDLSDNLGYPNTPTSGFASVRFECGPDGNPTNIVVIN
HSNSRFDAPSVRAVHLLRNLHPLPDNVVRGQVFQANLIFATNEYELTRQARLLQQAEATRLASSHAEQTVLVLSSSARGP
G

Sequences:

>Translated_161_residues
MKNIVKFALAALLATGQGSVFAQNGHTVYAERHSRDVWIERVSDDLSDNLGYPNTPTSGFASVRFECGPDGNPTNIVVIN
HSNSRFDAPSVRAVHLLRNLHPLPDNVVRGQVFQANLIFATNEYELTRQARLLQQAEATRLASSHAEQTVLVLSSSARGP
G
>Mature_161_residues
MKNIVKFALAALLATGQGSVFAQNGHTVYAERHSRDVWIERVSDDLSDNLGYPNTPTSGFASVRFECGPDGNPTNIVVIN
HSNSRFDAPSVRAVHLLRNLHPLPDNVVRGQVFQANLIFATNEYELTRQARLLQQAEATRLASSHAEQTVLVLSSSARGP
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17564; Mature: 17564

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIVKFALAALLATGQGSVFAQNGHTVYAERHSRDVWIERVSDDLSDNLGYPNTPTSGF
CCHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCE
ASVRFECGPDGNPTNIVVINHSNSRFDAPSVRAVHLLRNLHPLPDNVVRGQVFQANLIFA
EEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHCCEEEEEEEEEE
TNEYELTRQARLLQQAEATRLASSHAEQTVLVLSSSARGPG
ECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKNIVKFALAALLATGQGSVFAQNGHTVYAERHSRDVWIERVSDDLSDNLGYPNTPTSGF
CCHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCE
ASVRFECGPDGNPTNIVVINHSNSRFDAPSVRAVHLLRNLHPLPDNVVRGQVFQANLIFA
EEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHCCEEEEEEEEEE
TNEYELTRQARLLQQAEATRLASSHAEQTVLVLSSSARGPG
ECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA