| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201085
Identifier: 87201085
GI number: 87201085
Start: 3292116
End: 3293099
Strand: Reverse
Name: 87201085
Synonym: Saro_3073
Alternate gene names: NA
Gene position: 3293099-3292116 (Counterclockwise)
Preceding gene: 87201086
Following gene: 87201084
Centisome position: 92.46
GC content: 65.45
Gene sequence:
>984_bases ATGATGGCGCTCAAGACACGCATCACCCAGATGCTCGGCATCGAGCATCCGATCGTCCAGGGCGGGATGATGAACGTCGG CTATGCCGAACTGGCAAGCGCGGTTTCCAACGCGGGCGGCCTCGGCATCATAACCGCGCTGACCCAGCCCACGCCCGAGG CCCTGCGCGACGAGATCGAGCGCACCAAGGCAATGACGTCGAAGCCGTTCGGCGTGAACATGACCATCTTCCCGACCGTC AATTCGCCCGACTACAAGGCCTATGCCCAGGCCATCATCGATGGCGGCGTGAAGATCGTCGAGACCGCCGGGACCCAGGC CGTGCGCGAGATCTGGGAAATGCTCAAGCCCCACGGCGTGACGATCCTGCATAAGTGCACCGCCGTCCGCCATGCGCTCT CGGCCGAAAGGGCGGGTTGCGACATCATCTCGATCGACGGCTTCGAATGCGCCGGCCACCCCGGCGAGGACGACATTCCC GGCCTGATCCTGATCCCCGCCGCGGCAGACAAGGTGAAGATCCCGCTGCTCGCTTCTGGCGGGTTCGGTGACGGGCGCGG CCTGGTCGCGGCTCTCGCACTCGGCGCGGAGGGCATAAACATGGGCACGCGCTTCTGCGCCACGGTCGAGGCGCCGATCC ACGAGAACGTGAAGCAGGCCTATATCGACAACGACGAGCGGGGCAGCTTCCTGATCTTCCGCAATTTCAAGAACACCGCG CGCGTCGGGCGCAGCGCCGTATCGGAAGAGGTGGTGCGCCGCCTGTCGAAGCCCGATGCCGTGTTCGAGGACGTGCGCGA ACTGGTGGCCGGAACCGCCGGCAAGGAACTCTTGCAGACCGGCGATCTTTCCCGGGGCGTGTTCTGGGCCGGCATGGTCC AGGGCCTGATCCACGACATTCCCACCTGCCAGCAGCTGATCGAGCGTATCGTGGCCGACGCCGAGGACATCATCCGGGGC AGGCTCGGAGGGTTCCTGGCATGA
Upstream 100 bases:
>100_bases CTGCGCATGGCGCTCGGAGAGGGGTACGATATTCTCTAAGCGGCTTGCCATCGTTCCCAATAGCGTTTAACCGATCGGTT AAACGCTATTGGGAGAGGCA
Downstream 100 bases:
>100_bases AGATCGACAGCACGACCAGCGCGGTCGTCACCGGCGGTGCATCCGGCCTCGGCCGCGCAACGGCAGAGGCGCTCGCGGCC GCCGGGGTGAAGGTCGCCAT
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIERTKAMTSKPFGVNMTIFPTV NSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGVTILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIP GLILIPAAADKVKIPLLASGGFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDIPTCQQLIERIVADAEDIIRG RLGGFLA
Sequences:
>Translated_327_residues MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIERTKAMTSKPFGVNMTIFPTV NSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGVTILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIP GLILIPAAADKVKIPLLASGGFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDIPTCQQLIERIVADAEDIIRG RLGGFLA >Mature_327_residues MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIERTKAMTSKPFGVNMTIFPTV NSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGVTILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIP GLILIPAAADKVKIPLLASGGFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDIPTCQQLIERIVADAEDIIRG RLGGFLA
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 34873; Mature: 34873
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIE CCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH RTKAMTSKPFGVNMTIFPTVNSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGV HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCC TILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIPGLILIPAAADKVKIPLLASG HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC GFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA CCCCCHHHHHHHHHCCCCCCCCCHHEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHH RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC PTCQQLIERIVADAEDIIRGRLGGFLA HHHHHHHHHHHHCHHHHHHHHHCCCCC >Mature Secondary Structure MMALKTRITQMLGIEHPIVQGGMMNVGYAELASAVSNAGGLGIITALTQPTPEALRDEIE CCHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH RTKAMTSKPFGVNMTIFPTVNSPDYKAYAQAIIDGGVKIVETAGTQAVREIWEMLKPHGV HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCC TILHKCTAVRHALSAERAGCDIISIDGFECAGHPGEDDIPGLILIPAAADKVKIPLLASG HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC GFGDGRGLVAALALGAEGINMGTRFCATVEAPIHENVKQAYIDNDERGSFLIFRNFKNTA CCCCCHHHHHHHHHCCCCCCCCCHHEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHH RVGRSAVSEEVVRRLSKPDAVFEDVRELVAGTAGKELLQTGDLSRGVFWAGMVQGLIHDI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC PTCQQLIERIVADAEDIIRGRLGGFLA HHHHHHHHHHHHCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]