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The map label for this gene is cirA [C]

Identifier: 87201048

GI number: 87201048

Start: 3249171

End: 3251885

Strand: Reverse

Name: cirA [C]

Synonym: Saro_3036

Alternate gene names: 87201048

Gene position: 3251885-3249171 (Counterclockwise)

Preceding gene: 87201049

Following gene: 87201039

Centisome position: 91.3

GC content: 63.06

Gene sequence:

>2715_bases
ATGAAGAACCAGGTTCGGCTCAGGTCGCGGGCCATGAGGGCATTCGCTGCGAGCACCATCCTGTCGACCGTCGTGCTGCC
GGCGGCAGCCTATGCCGCTGAAGTCACAGAGGTTGCCGCGCAGCCTGCCATCGAGACCACGCCTGCCGAGGAGCAGGTCC
AGCCCGAAGGCTTCGGCGACATCGTGGTCACCGCGACCCGCCAGGCGCAGTCGATCCAGAAGGTGCCGATCTCGATCCAG
GCGCTGAACGCCGACACGCTCCAGCAGCGGCAGGTCAAGGGCCTGACCGACTTCGCCACGCTCATGCCTTCGGTCAGCTT
CGCCGGCATCGGCCCGGGCCGCAATACGCCCTATTTCCGCGGCATCGTGCCTGCGGGTGGCGCGCGCGAATCGGTGGGCT
ACTACATCGACGACATTCCGATCACCGGCACCGGCCTGCCCGACATCCACGTCTACGACGTCGAACGCGTCGAGGGCCTG
TCCGGGCCGCAGGGCACGCTGTACGGCGCGGGCTCGCTGGCCGGCACGATCCGCTTCATCACCAACAAGCCCAAGTTCGA
GCGGTTCGAGTACGGCTACGATGCCGAGGTGAACAAGTACGGCAAGGGCGACTTCGGCGGGCAGTACCAGTCCTACATCA
ACGTGCCCGTCGCCAGCAATCTGGCGGTGCGCGCGATGGGCTACTACCGCCGCGACGGCGGATATGTCGACAACACGCCG
AACAACGGCAAGTTCAATGACGGCAGTTCCTCGACCCTGAGCCTTGGCGACAACAATCCCGATACTTTCTACACGCTCGA
CAATTCCGACATCGCGCAGGACGACTACAACTCGATCGAGGAATATGGCGGGCGCCTGCAGGTGCTGTGGGAAATGGCGC
CCGGCTGGGAGATCGCCTCGCAGCTTACCGCGCAGCAGCAGATCGCCAACGGGTACTTCGGCTTCGACCCGCGCGTGGGC
GACCTTGAAGTGCACGACTTCGACACGACCCAGCAGAACGACAAGTGGTACCAGGCGGCGCTGACCGTCCATGGCCATAT
CGGAGACTGGGACGTGGTCTCCTCGACCGGCTACTACCAGCGCCAGATCAACCTGCTCAACGACTATACCTACTACACCG
TCACCTATGACCGCTTCGGCGCCGGTTACGAGAACTACCTCCAGTTCTTCGACAAGAACGGCTGCACGGGTTCTGGCGAC
GCGATGAAGTGCACCAGCCTGATCGATCCGACGCAGTTCTATCGGGGGCTGCGCAACGAGAACAAGTTCACCCAGGAACT
GCGCTTCACCACGCCCAAGTCGTGGCCGTTCGACGTGACCTTCGGCGGTTTCTATCACCGGCAGAAGAACGAGGTGAACA
ACGACTACTCGATCCATGGGCTGGACCAGATCGCAGGCTATACCCAGTCGGGCGGGGGCGACAGCAACCCGGAAGGGTTC
GGCATTCCGACGACGGCCGGCGGCACGATGGTCGTGGGCTCGCCGGCGGTGAAGCGCGATGCCTTCTACATGAGCGAGCA
GAACCAGTACTGGAACGACTATGCGCTGTTCGCCGAAGGGCACTACAACATTACCCCGACGCTCAAGCTGACGGGCGGCA
TCCGCTATTTCTGGACCAACTTCCGTGTGCTCGGTTTCGCGGGCGTTGCCGCTTCTGCACGCAACACGATCACGTCGCTC
TATGTGCCCACTGGCGAATATGGCTGCCCCGTGCCGCTTCCGGCGGAGCGCCTGCAGTGCCTCAACTCGAACTTCGCAGC
CGCCGATGGCGTGGGCCGCTACAAGGAGGAAGGCGAAACCCACAAGGTCGCGCTCAACTGGCAGTTCGAACCGTCGAAGA
TGGTCTATTTCAACTATTCGACCGGCTTCCGCCCTGGCGGCTTCAACCGTCCGTTGCGCATCCGCGGCGTCGGCGTGGCC
ACGGTGCCGTCTTTCGAATCTGAAAGGCTGACCAACTTCGAGCTGGGCTTCAAGACCACGTGGAACAACATGTTCCGCTT
CAACGCCTCGCTCTATTACGAGAACTGGGACAACATCCAGTACAGCGTGGTCATCGCGGGCACGCAGGGCGCGGGCATGA
CGGGCAACGCTGGCAAGGCGCGCGTCTATGGCGTGGAGTTCGACGCGGACCTCAAGCTTGGCAAGTTCACCATTTCGACC
AACGGCGCCTACAACAACGCCGCGCTCAAGGGGAACTTCTGCAACTTCAAGGTCGACACCTCGACGCTGGCGATCACCCA
GCTTGCGACCTGCACCCCCGGCGCCACTTTCGGCAGCCCGGCAGTGGCCGAAGTGGCGGCGACCGACGGCACCCGCCTGC
CGCGCCAGCCGCGTTTCAAGGGCACGACCTCGGTGCGCTACGACACGCAGCTTGGCGACATGGACCTCTACCTGCAGGGC
GCCGCGCTGTATCAGACCAACGCCACGCAGAACCTCAATGTCTACAACAACAACCTGCTCGTCTGCCCCGACATCGCGGA
CGAAGCGACCGATGCCGGCCGTTCGTGCGCGACCCCGGGCTTCGTCAGCTTCGACTTCTCGGGCGGGATCAAGAAGGACA
ACTGGACGCTCGACCTGTTCATCCAGAACGCCTTCGACAAGCGCGGCGAGCTGACCCGCAACACCTTCTGCTCGATCCAG
TTCTGCTCGGACTCGTCGCGCACCTTCACGATCAAGCCGCAGTTCTTCGGAATGCGCTGGGGCCAGAAATTCTGA

Upstream 100 bases:

>100_bases
TGTGGGCTCATGTTGCAGCGCCGCAAAGGCGCGCACTCGAGGGACGGATGTGCGGAGGGGCCGGGGATCGCCCGTGTCAC
TGCATAGGGGTAGAAATGAC

Downstream 100 bases:

>100_bases
CCCATCCTGAAATCCTGCGAAGGAACCTTGCCCCCGTGGTCCAAAGCCGCGGGGGCTTTTTTTGGCCGTGTCGGGAGCCG
GCGGACGTTATCGGAGCGGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; Nb-Dependent Receptor; NB-Dependent Receptor Plug Domain Protein; NB Dependent Receptor; Outer Membrane nB-Dependent Receptor; NB-Dependent Receptor Protein; NB-Dependent Siderophore Receptor; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 904; Mature: 904

Protein sequence:

>904_residues
MKNQVRLRSRAMRAFAASTILSTVVLPAAAYAAEVTEVAAQPAIETTPAEEQVQPEGFGDIVVTATRQAQSIQKVPISIQ
ALNADTLQQRQVKGLTDFATLMPSVSFAGIGPGRNTPYFRGIVPAGGARESVGYYIDDIPITGTGLPDIHVYDVERVEGL
SGPQGTLYGAGSLAGTIRFITNKPKFERFEYGYDAEVNKYGKGDFGGQYQSYINVPVASNLAVRAMGYYRRDGGYVDNTP
NNGKFNDGSSSTLSLGDNNPDTFYTLDNSDIAQDDYNSIEEYGGRLQVLWEMAPGWEIASQLTAQQQIANGYFGFDPRVG
DLEVHDFDTTQQNDKWYQAALTVHGHIGDWDVVSSTGYYQRQINLLNDYTYYTVTYDRFGAGYENYLQFFDKNGCTGSGD
AMKCTSLIDPTQFYRGLRNENKFTQELRFTTPKSWPFDVTFGGFYHRQKNEVNNDYSIHGLDQIAGYTQSGGGDSNPEGF
GIPTTAGGTMVVGSPAVKRDAFYMSEQNQYWNDYALFAEGHYNITPTLKLTGGIRYFWTNFRVLGFAGVAASARNTITSL
YVPTGEYGCPVPLPAERLQCLNSNFAAADGVGRYKEEGETHKVALNWQFEPSKMVYFNYSTGFRPGGFNRPLRIRGVGVA
TVPSFESERLTNFELGFKTTWNNMFRFNASLYYENWDNIQYSVVIAGTQGAGMTGNAGKARVYGVEFDADLKLGKFTIST
NGAYNNAALKGNFCNFKVDTSTLAITQLATCTPGATFGSPAVAEVAATDGTRLPRQPRFKGTTSVRYDTQLGDMDLYLQG
AALYQTNATQNLNVYNNNLLVCPDIADEATDAGRSCATPGFVSFDFSGGIKKDNWTLDLFIQNAFDKRGELTRNTFCSIQ
FCSDSSRTFTIKPQFFGMRWGQKF

Sequences:

>Translated_904_residues
MKNQVRLRSRAMRAFAASTILSTVVLPAAAYAAEVTEVAAQPAIETTPAEEQVQPEGFGDIVVTATRQAQSIQKVPISIQ
ALNADTLQQRQVKGLTDFATLMPSVSFAGIGPGRNTPYFRGIVPAGGARESVGYYIDDIPITGTGLPDIHVYDVERVEGL
SGPQGTLYGAGSLAGTIRFITNKPKFERFEYGYDAEVNKYGKGDFGGQYQSYINVPVASNLAVRAMGYYRRDGGYVDNTP
NNGKFNDGSSSTLSLGDNNPDTFYTLDNSDIAQDDYNSIEEYGGRLQVLWEMAPGWEIASQLTAQQQIANGYFGFDPRVG
DLEVHDFDTTQQNDKWYQAALTVHGHIGDWDVVSSTGYYQRQINLLNDYTYYTVTYDRFGAGYENYLQFFDKNGCTGSGD
AMKCTSLIDPTQFYRGLRNENKFTQELRFTTPKSWPFDVTFGGFYHRQKNEVNNDYSIHGLDQIAGYTQSGGGDSNPEGF
GIPTTAGGTMVVGSPAVKRDAFYMSEQNQYWNDYALFAEGHYNITPTLKLTGGIRYFWTNFRVLGFAGVAASARNTITSL
YVPTGEYGCPVPLPAERLQCLNSNFAAADGVGRYKEEGETHKVALNWQFEPSKMVYFNYSTGFRPGGFNRPLRIRGVGVA
TVPSFESERLTNFELGFKTTWNNMFRFNASLYYENWDNIQYSVVIAGTQGAGMTGNAGKARVYGVEFDADLKLGKFTIST
NGAYNNAALKGNFCNFKVDTSTLAITQLATCTPGATFGSPAVAEVAATDGTRLPRQPRFKGTTSVRYDTQLGDMDLYLQG
AALYQTNATQNLNVYNNNLLVCPDIADEATDAGRSCATPGFVSFDFSGGIKKDNWTLDLFIQNAFDKRGELTRNTFCSIQ
FCSDSSRTFTIKPQFFGMRWGQKF
>Mature_904_residues
MKNQVRLRSRAMRAFAASTILSTVVLPAAAYAAEVTEVAAQPAIETTPAEEQVQPEGFGDIVVTATRQAQSIQKVPISIQ
ALNADTLQQRQVKGLTDFATLMPSVSFAGIGPGRNTPYFRGIVPAGGARESVGYYIDDIPITGTGLPDIHVYDVERVEGL
SGPQGTLYGAGSLAGTIRFITNKPKFERFEYGYDAEVNKYGKGDFGGQYQSYINVPVASNLAVRAMGYYRRDGGYVDNTP
NNGKFNDGSSSTLSLGDNNPDTFYTLDNSDIAQDDYNSIEEYGGRLQVLWEMAPGWEIASQLTAQQQIANGYFGFDPRVG
DLEVHDFDTTQQNDKWYQAALTVHGHIGDWDVVSSTGYYQRQINLLNDYTYYTVTYDRFGAGYENYLQFFDKNGCTGSGD
AMKCTSLIDPTQFYRGLRNENKFTQELRFTTPKSWPFDVTFGGFYHRQKNEVNNDYSIHGLDQIAGYTQSGGGDSNPEGF
GIPTTAGGTMVVGSPAVKRDAFYMSEQNQYWNDYALFAEGHYNITPTLKLTGGIRYFWTNFRVLGFAGVAASARNTITSL
YVPTGEYGCPVPLPAERLQCLNSNFAAADGVGRYKEEGETHKVALNWQFEPSKMVYFNYSTGFRPGGFNRPLRIRGVGVA
TVPSFESERLTNFELGFKTTWNNMFRFNASLYYENWDNIQYSVVIAGTQGAGMTGNAGKARVYGVEFDADLKLGKFTIST
NGAYNNAALKGNFCNFKVDTSTLAITQLATCTPGATFGSPAVAEVAATDGTRLPRQPRFKGTTSVRYDTQLGDMDLYLQG
AALYQTNATQNLNVYNNNLLVCPDIADEATDAGRSCATPGFVSFDFSGGIKKDNWTLDLFIQNAFDKRGELTRNTFCSIQ
FCSDSSRTFTIKPQFFGMRWGQKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99727; Mature: 99727

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQVRLRSRAMRAFAASTILSTVVLPAAAYAAEVTEVAAQPAIETTPAEEQVQPEGFGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCC
IVVTATRQAQSIQKVPISIQALNADTLQQRQVKGLTDFATLMPSVSFAGIGPGRNTPYFR
EEEEECHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCEEE
GIVPAGGARESVGYYIDDIPITGTGLPDIHVYDVERVEGLSGPQGTLYGAGSLAGTIRFI
EEECCCCCCCCCCEEEECEEECCCCCCCEEEEEHHHHCCCCCCCCEEEECCCCEEEEEEE
TNKPKFERFEYGYDAEVNKYGKGDFGGQYQSYINVPVASNLAVRAMGYYRRDGGYVDNTP
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCC
NNGKFNDGSSSTLSLGDNNPDTFYTLDNSDIAQDDYNSIEEYGGRLQVLWEMAPGWEIAS
CCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEEEEECCCHHHHH
QLTAQQQIANGYFGFDPRVGDLEVHDFDTTQQNDKWYQAALTVHGHIGDWDVVSSTGYYQ
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCEEECCCCCEE
RQINLLNDYTYYTVTYDRFGAGYENYLQFFDKNGCTGSGDAMKCTSLIDPTQFYRGLRNE
EEEEEECCEEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCCCEEEHHCCCHHHHHHHHCCC
NKFTQELRFTTPKSWPFDVTFGGFYHRQKNEVNNDYSIHGLDQIAGYTQSGGGDSNPEGF
CHHHHHHEECCCCCCCEEEEECCEEECCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCCC
GIPTTAGGTMVVGSPAVKRDAFYMSEQNQYWNDYALFAEGHYNITPTLKLTGGIRYFWTN
CCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCEEEEEEC
FRVLGFAGVAASARNTITSLYVPTGEYGCPVPLPAERLQCLNSNFAAADGVGRYKEEGET
EEEEEEECCHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCE
HKVALNWQFEPSKMVYFNYSTGFRPGGFNRPLRIRGVGVATVPSFESERLTNFELGFKTT
EEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECEEEC
WNNMFRFNASLYYENWDNIQYSVVIAGTQGAGMTGNAGKARVYGVEFDADLKLGKFTIST
CCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC
NGAYNNAALKGNFCNFKVDTSTLAITQLATCTPGATFGSPAVAEVAATDGTRLPRQPRFK
CCCCCCCEEECCCEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCC
GTTSVRYDTQLGDMDLYLQGAALYQTNATQNLNVYNNNLLVCPDIADEATDAGRSCATPG
CCCEEEEECCCCCEEEEEECEEEEECCCCCEEEEECCCEEECCCCCCHHHCCCCCCCCCC
FVSFDFSGGIKKDNWTLDLFIQNAFDKRGELTRNTFCSIQFCSDSSRTFTIKPQFFGMRW
EEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCHHCCCCC
GQKF
CCCC
>Mature Secondary Structure
MKNQVRLRSRAMRAFAASTILSTVVLPAAAYAAEVTEVAAQPAIETTPAEEQVQPEGFGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCC
IVVTATRQAQSIQKVPISIQALNADTLQQRQVKGLTDFATLMPSVSFAGIGPGRNTPYFR
EEEEECHHHHHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCEEE
GIVPAGGARESVGYYIDDIPITGTGLPDIHVYDVERVEGLSGPQGTLYGAGSLAGTIRFI
EEECCCCCCCCCCEEEECEEECCCCCCCEEEEEHHHHCCCCCCCCEEEECCCCEEEEEEE
TNKPKFERFEYGYDAEVNKYGKGDFGGQYQSYINVPVASNLAVRAMGYYRRDGGYVDNTP
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCC
NNGKFNDGSSSTLSLGDNNPDTFYTLDNSDIAQDDYNSIEEYGGRLQVLWEMAPGWEIAS
CCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEEEEEECCCHHHHH
QLTAQQQIANGYFGFDPRVGDLEVHDFDTTQQNDKWYQAALTVHGHIGDWDVVSSTGYYQ
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCEEECCCCCEE
RQINLLNDYTYYTVTYDRFGAGYENYLQFFDKNGCTGSGDAMKCTSLIDPTQFYRGLRNE
EEEEEECCEEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCCCEEEHHCCCHHHHHHHHCCC
NKFTQELRFTTPKSWPFDVTFGGFYHRQKNEVNNDYSIHGLDQIAGYTQSGGGDSNPEGF
CHHHHHHEECCCCCCCEEEEECCEEECCCCCCCCCEEECCHHHHCCCCCCCCCCCCCCCC
GIPTTAGGTMVVGSPAVKRDAFYMSEQNQYWNDYALFAEGHYNITPTLKLTGGIRYFWTN
CCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCEEEEEEC
FRVLGFAGVAASARNTITSLYVPTGEYGCPVPLPAERLQCLNSNFAAADGVGRYKEEGET
EEEEEEECCHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCE
HKVALNWQFEPSKMVYFNYSTGFRPGGFNRPLRIRGVGVATVPSFESERLTNFELGFKTT
EEEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECEEEC
WNNMFRFNASLYYENWDNIQYSVVIAGTQGAGMTGNAGKARVYGVEFDADLKLGKFTIST
CCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC
NGAYNNAALKGNFCNFKVDTSTLAITQLATCTPGATFGSPAVAEVAATDGTRLPRQPRFK
CCCCCCCEEECCCEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCC
GTTSVRYDTQLGDMDLYLQGAALYQTNATQNLNVYNNNLLVCPDIADEATDAGRSCATPG
CCCEEEEECCCCCEEEEEECEEEEECCCCCEEEEECCCEEECCCCCCHHHCCCCCCCCCC
FVSFDFSGGIKKDNWTLDLFIQNAFDKRGELTRNTFCSIQFCSDSSRTFTIKPQFFGMRW
EEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCHHCCCCC
GQKF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA