| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201046
Identifier: 87201046
GI number: 87201046
Start: 3246286
End: 3246966
Strand: Direct
Name: 87201046
Synonym: Saro_3034
Alternate gene names: NA
Gene position: 3246286-3246966 (Clockwise)
Preceding gene: 87201045
Following gene: 87201047
Centisome position: 91.15
GC content: 69.16
Gene sequence:
>681_bases ATGTATAAACGGCCCCGCATCGCCGTGATCGACAGCGGCGTCCATCCCGACCACCCGCACATCGACGCGTTACGGCTCCT GCCCGGGATCTCCGTCCTTGCCGACGGAACTGTCCTTGTCGACCCGGTGCAAAGCCTCGACACGCTGGGCCACGGCACCG CGGTCACCGCCGCGATCCAGGAGCTGGCGCCAGACGCCGAAATCCTGCCCATCCGGGTCTTCCGCGATGGCTTGCGGGCG AGCGCACGGGCGCTTGCCACCGGCATCCGCCAGGCACTGGAAGCGCAAGCGGACATGATCAACCTCAGCCTGGGCACAAC CAACCCCGCGCACGCCGACGTGTTCGAAGCGCTTGCCGGGGAAGCCGCTGCCCAAGGAACCCTGATCGTCGCCGCCTCCG AGGCCGAGGGTACGCCCTGCTGGCCCGGGGCATTGCCGCAGGTGGTTGGCGTCGGGCTCGACTGGGACCTGCCGCGCGGG ACGCCGGTCCTTTCGCCTGACCGCCAGATGGTCATGGCGTCCGGATACCCTCGCCCGATCCCGGGGGTCGAGCCACGCCG GAACCTTTACGGCGTGAGCTTCGCAGTGGCGCAGGTGACCGGATGGATCGCCGCGCGCGGCGTGCACGACCTGAAAGTGA CCGAAAGCGTCCTTGCGGCGCTCGAAGCTTCCCCGGCCTGA
Upstream 100 bases:
>100_bases CTCGTCGTCATCACCCACAAGCCGGCGCTCGCCGATCTGGCCGACCATGTCGTGCGGCTCGAACAGGGCAATGCCACGAT CCAGCCCCAGGTGCCTGCCC
Downstream 100 bases:
>100_bases CCCTTGCGCCATTTGACGTACACCCAACAAGCGGTGCGAGGCATAGGCTGACGCCATGGTCCAACAACTTCGCCCGCCGC CCTCGCCAGCCGCCGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase S8 And S; Peptidase S8 And; FHA Domain-Containing Protein; Peptidase Families S8 And
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MYKRPRIAVIDSGVHPDHPHIDALRLLPGISVLADGTVLVDPVQSLDTLGHGTAVTAAIQELAPDAEILPIRVFRDGLRA SARALATGIRQALEAQADMINLSLGTTNPAHADVFEALAGEAAAQGTLIVAASEAEGTPCWPGALPQVVGVGLDWDLPRG TPVLSPDRQMVMASGYPRPIPGVEPRRNLYGVSFAVAQVTGWIAARGVHDLKVTESVLAALEASPA
Sequences:
>Translated_226_residues MYKRPRIAVIDSGVHPDHPHIDALRLLPGISVLADGTVLVDPVQSLDTLGHGTAVTAAIQELAPDAEILPIRVFRDGLRA SARALATGIRQALEAQADMINLSLGTTNPAHADVFEALAGEAAAQGTLIVAASEAEGTPCWPGALPQVVGVGLDWDLPRG TPVLSPDRQMVMASGYPRPIPGVEPRRNLYGVSFAVAQVTGWIAARGVHDLKVTESVLAALEASPA >Mature_226_residues MYKRPRIAVIDSGVHPDHPHIDALRLLPGISVLADGTVLVDPVQSLDTLGHGTAVTAAIQELAPDAEILPIRVFRDGLRA SARALATGIRQALEAQADMINLSLGTTNPAHADVFEALAGEAAAQGTLIVAASEAEGTPCWPGALPQVVGVGLDWDLPRG TPVLSPDRQMVMASGYPRPIPGVEPRRNLYGVSFAVAQVTGWIAARGVHDLKVTESVLAALEASPA
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23571; Mature: 23571
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKRPRIAVIDSGVHPDHPHIDALRLLPGISVLADGTVLVDPVQSLDTLGHGTAVTAAIQ CCCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHCCCEEEECCHHHHHHCCCCHHHHHHHH ELAPDAEILPIRVFRDGLRASARALATGIRQALEAQADMINLSLGTTNPAHADVFEALAG HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH EAAAQGTLIVAASEAEGTPCWPGALPQVVGVGLDWDLPRGTPVLSPDRQMVMASGYPRPI HHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC PGVEPRRNLYGVSFAVAQVTGWIAARGVHDLKVTESVLAALEASPA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYKRPRIAVIDSGVHPDHPHIDALRLLPGISVLADGTVLVDPVQSLDTLGHGTAVTAAIQ CCCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHCCCEEEECCHHHHHHCCCCHHHHHHHH ELAPDAEILPIRVFRDGLRASARALATGIRQALEAQADMINLSLGTTNPAHADVFEALAG HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH EAAAQGTLIVAASEAEGTPCWPGALPQVVGVGLDWDLPRGTPVLSPDRQMVMASGYPRPI HHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC PGVEPRRNLYGVSFAVAQVTGWIAARGVHDLKVTESVLAALEASPA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA