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The map label for this gene is 87201039

Identifier: 87201039

GI number: 87201039

Start: 3237240

End: 3238598

Strand: Reverse

Name: 87201039

Synonym: Saro_3027

Alternate gene names: NA

Gene position: 3238598-3237240 (Counterclockwise)

Preceding gene: 87201048

Following gene: 87201032

Centisome position: 90.93

GC content: 70.2

Gene sequence:

>1359_bases
ATGCGCATCGGAGCAAGGACTTGCCCTGCGACGCGCCATGTTCCACCTGTCCATCGGCGGCTACCATACGCAGTTCGCGC
AGCGCCGCAGGGGAATGGCTTGGACGTTTTCGACCAGATGGCAGGATTGCAGGCCTCGGCACTGGCCGCCGCCGTGGCGG
CGGGGCTGATCCTCGGGATCGAGCGGGGCTGGACCCAGCGCGAACGACCCGATGGCGCGCGCGTCGCCGGGATCCGCACG
TTCGGACTGTTCGGGCTTGTTGGCGGTCTTGCGGGGCTTCTTCCGGTGCCCGCGATGACGGTGCTGCTCGCGACGGCGGG
CCTTGTCGTGGCGGTGGGATACCGCGCCGCGCTGCGCGAGGACCAGCTATCGGCCACCAATGCCGTGGCCGCCCTGCTGA
CACTGGCAATCGGATGCGCCGCGACCCGCCTGTCGCCGGTGCTGGCGCTCGGGTCGGCGGCGGCGAGCTTTGCGTTGCTG
CGCTCTCGCCAGTCGCTGCACGCGCTGCTGCGGGGGCTTGAAGAGCGCGAGATCGAGGCGGTGGCGCGCTTCCTGCTGGT
TTCGCTGGTGATCCTGCCGATCCTGCCGGATGCGGATTTCGGCCCATACGGCGCGTGGAATCCCCGGCGCATCTGGATGG
TGGTCGTGATGGTGACCGGCCTTTCGTTTGCCGGATATGTCGCCGCGCGCCGGCTTGGGAGCGAGCGCGGAACGATGATC
GTGGCCGTGACCGGGGCGCTGGTCTCCTCGACGGCGGTGACGGCAAGTTATGCGCGCCGCCTGGTTGCAGAGCCCGAGGC
GCGGGGCGCATTGGTTGCGGGTATCGCGATGGCATCGGTGGTGATGTTCGTGCGCGTACAGTTGGTGACGCTGGTTCTGG
CACCGCGCGCGCTGCCGACGTTGGCGTTGGTGCTTGCGCCGGCGGTGGTCGTGTCGGTCCTGCTCGCGCTCGTCGCCTGG
CGGCGCCAGGGTGAGGCGACGGGCGGCGAGGTCGCCATCGGCAATCCTTTCGACTTCGGCCCGGCGCTGCTGCTGGCGGC
GATGGTCGCCGTCCTCTCGCTCATCGCGCGCTGGGCGCTCGATGCGTTCGGCGGACACGGCATGGCGCTGTTGCTGGGGC
TGACCGGCATGATGGACGTCGATGCGGCGGTGATGACGTTGTCGGGCCTTCCGCGAGAAGCGCTGGCCGACGATCTGGCA
GGACTGGTGCTGGCCGGACCCGTGCTGGCCAATACGCTGGTGAAGGCGGGGATGGCGCTTGCGCTGGGCGGCAGGCGCCA
CGGCATGCAGGCAGCCGCCCCGCTCCTTGCTGCCTGCGCGGCGTCGGCGCTGGGCCTCGCGTGGTGGTGGCTTGCGTGA

Upstream 100 bases:

>100_bases
GTGGCTGCGAGGCAAAGACTGGACAGATGTCAAAAGTTGGTCAACGCCTTTGTTGTGCACTTGCGAGAAAAGATTTCGAC
GTTCCCGGGGAGCGTGCGGA

Downstream 100 bases:

>100_bases
AACCGCAAGGAGAGAGGTTGACCGCAGCCCTCACCCTATGGCAAGCGCCACCACAATGAACGACGCCAAGCGCGTCTCGC
CCGGGCGGGTGTAGCTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MRIGARTCPATRHVPPVHRRLPYAVRAAPQGNGLDVFDQMAGLQASALAAAVAAGLILGIERGWTQRERPDGARVAGIRT
FGLFGLVGGLAGLLPVPAMTVLLATAGLVVAVGYRAALREDQLSATNAVAALLTLAIGCAATRLSPVLALGSAAASFALL
RSRQSLHALLRGLEEREIEAVARFLLVSLVILPILPDADFGPYGAWNPRRIWMVVVMVTGLSFAGYVAARRLGSERGTMI
VAVTGALVSSTAVTASYARRLVAEPEARGALVAGIAMASVVMFVRVQLVTLVLAPRALPTLALVLAPAVVVSVLLALVAW
RRQGEATGGEVAIGNPFDFGPALLLAAMVAVLSLIARWALDAFGGHGMALLLGLTGMMDVDAAVMTLSGLPREALADDLA
GLVLAGPVLANTLVKAGMALALGGRRHGMQAAAPLLAACAASALGLAWWWLA

Sequences:

>Translated_452_residues
MRIGARTCPATRHVPPVHRRLPYAVRAAPQGNGLDVFDQMAGLQASALAAAVAAGLILGIERGWTQRERPDGARVAGIRT
FGLFGLVGGLAGLLPVPAMTVLLATAGLVVAVGYRAALREDQLSATNAVAALLTLAIGCAATRLSPVLALGSAAASFALL
RSRQSLHALLRGLEEREIEAVARFLLVSLVILPILPDADFGPYGAWNPRRIWMVVVMVTGLSFAGYVAARRLGSERGTMI
VAVTGALVSSTAVTASYARRLVAEPEARGALVAGIAMASVVMFVRVQLVTLVLAPRALPTLALVLAPAVVVSVLLALVAW
RRQGEATGGEVAIGNPFDFGPALLLAAMVAVLSLIARWALDAFGGHGMALLLGLTGMMDVDAAVMTLSGLPREALADDLA
GLVLAGPVLANTLVKAGMALALGGRRHGMQAAAPLLAACAASALGLAWWWLA
>Mature_452_residues
MRIGARTCPATRHVPPVHRRLPYAVRAAPQGNGLDVFDQMAGLQASALAAAVAAGLILGIERGWTQRERPDGARVAGIRT
FGLFGLVGGLAGLLPVPAMTVLLATAGLVVAVGYRAALREDQLSATNAVAALLTLAIGCAATRLSPVLALGSAAASFALL
RSRQSLHALLRGLEEREIEAVARFLLVSLVILPILPDADFGPYGAWNPRRIWMVVVMVTGLSFAGYVAARRLGSERGTMI
VAVTGALVSSTAVTASYARRLVAEPEARGALVAGIAMASVVMFVRVQLVTLVLAPRALPTLALVLAPAVVVSVLLALVAW
RRQGEATGGEVAIGNPFDFGPALLLAAMVAVLSLIARWALDAFGGHGMALLLGLTGMMDVDAAVMTLSGLPREALADDLA
GLVLAGPVLANTLVKAGMALALGGRRHGMQAAAPLLAACAASALGLAWWWLA

Specific function: Unknown

COG id: COG3174

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To P.aeruginosa PA0043 and M.thermoautotrophicum MTH1451 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46522; Mature: 46522

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGARTCPATRHVPPVHRRLPYAVRAAPQGNGLDVFDQMAGLQASALAAAVAAGLILGI
CCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
ERGWTQRERPDGARVAGIRTFGLFGLVGGLAGLLPVPAMTVLLATAGLVVAVGYRAALRE
HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQLSATNAVAALLTLAIGCAATRLSPVLALGSAAASFALLRSRQSLHALLRGLEEREIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARFLLVSLVILPILPDADFGPYGAWNPRRIWMVVVMVTGLSFAGYVAARRLGSERGTMI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEE
VAVTGALVSSTAVTASYARRLVAEPEARGALVAGIAMASVVMFVRVQLVTLVLAPRALPT
EEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LALVLAPAVVVSVLLALVAWRRQGEATGGEVAIGNPFDFGPALLLAAMVAVLSLIARWAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
DAFGGHGMALLLGLTGMMDVDAAVMTLSGLPREALADDLAGLVLAGPVLANTLVKAGMAL
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGGRRHGMQAAAPLLAACAASALGLAWWWLA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIGARTCPATRHVPPVHRRLPYAVRAAPQGNGLDVFDQMAGLQASALAAAVAAGLILGI
CCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
ERGWTQRERPDGARVAGIRTFGLFGLVGGLAGLLPVPAMTVLLATAGLVVAVGYRAALRE
HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQLSATNAVAALLTLAIGCAATRLSPVLALGSAAASFALLRSRQSLHALLRGLEEREIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARFLLVSLVILPILPDADFGPYGAWNPRRIWMVVVMVTGLSFAGYVAARRLGSERGTMI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEE
VAVTGALVSSTAVTASYARRLVAEPEARGALVAGIAMASVVMFVRVQLVTLVLAPRALPT
EEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LALVLAPAVVVSVLLALVAWRRQGEATGGEVAIGNPFDFGPALLLAAMVAVLSLIARWAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
DAFGGHGMALLLGLTGMMDVDAAVMTLSGLPREALADDLAGLVLAGPVLANTLVKAGMAL
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGGRRHGMQAAAPLLAACAASALGLAWWWLA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]