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The map label for this gene is yqaN [H]

Identifier: 87201020

GI number: 87201020

Start: 3225798

End: 3226205

Strand: Reverse

Name: yqaN [H]

Synonym: Saro_3008

Alternate gene names: 87201020

Gene position: 3226205-3225798 (Counterclockwise)

Preceding gene: 87201021

Following gene: 87201019

Centisome position: 90.58

GC content: 61.52

Gene sequence:

>408_bases
ATGATGGAGTTCTCCTTCACCGTCCCCGGTGTGCCTGTCGGAAAGGGGAGGCCCCGTTTCGTCAAGGCTACTGGCCGCGC
CTACACGCCTGAAAAGACGGCATCGTATGAGAGCCTGATTGCCTATGCGGCGTCGCAGGCCATGCGCGGCGCGCAGCCAA
TCAACGCACCGATCGGTATCAAGGTGCAGGCCGTGTTCCCGATCCCGGCGAGCTGGACCAAGAAGCGCAAGGAAAGCGCA
GTCTGGCACACCAGCAAGCCCGATGGCGACAACATCCTCAAGGCACTTGGTGATGCCCTTAACGGCATTGTGTGGGCCGA
TGACAGTCAAGTTGCCCGCACATCGATCGCCAAGGTCTACGGCGACGTTCCCGGCCTGCATGTGTTCGTGGAGGCGCTGG
GCGTATGA

Upstream 100 bases:

>100_bases
TGACGAAGCGCAAGAAGCTCAAGGCTGCCGAGGCTCGCGAGATCATCCTCGCCCAGCATGAAAAGAACATGGCGGAATTT
CGCCGGAAGCTGGGGGCGGA

Downstream 100 bases:

>100_bases
GCAGCGAAGCGCTCGCATGGGCTTTCAAGCAAACCTGCAAGAGCAGCAGCGTGAAGTTTACGCTGGTGGCCATGTGCGAA
TGCGCCAATTACCGGACCGG

Product: endodeoxyribonuclease RusA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MMEFSFTVPGVPVGKGRPRFVKATGRAYTPEKTASYESLIAYAASQAMRGAQPINAPIGIKVQAVFPIPASWTKKRKESA
VWHTSKPDGDNILKALGDALNGIVWADDSQVARTSIAKVYGDVPGLHVFVEALGV

Sequences:

>Translated_135_residues
MMEFSFTVPGVPVGKGRPRFVKATGRAYTPEKTASYESLIAYAASQAMRGAQPINAPIGIKVQAVFPIPASWTKKRKESA
VWHTSKPDGDNILKALGDALNGIVWADDSQVARTSIAKVYGDVPGLHVFVEALGV
>Mature_135_residues
MMEFSFTVPGVPVGKGRPRFVKATGRAYTPEKTASYESLIAYAASQAMRGAQPINAPIGIKVQAVFPIPASWTKKRKESA
VWHTSKPDGDNILKALGDALNGIVWADDSQVARTSIAKVYGDVPGLHVFVEALGV

Specific function: Unknown

COG id: COG4570

COG function: function code L; Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008822 [H]

Pfam domain/function: PF05866 RusA [H]

EC number: NA

Molecular weight: Translated: 14442; Mature: 14442

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEFSFTVPGVPVGKGRPRFVKATGRAYTPEKTASYESLIAYAASQAMRGAQPINAPIGI
CCEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE
KVQAVFPIPASWTKKRKESAVWHTSKPDGDNILKALGDALNGIVWADDSQVARTSIAKVY
EEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHH
GDVPGLHVFVEALGV
CCCCCHHHHHHHHCC
>Mature Secondary Structure
MMEFSFTVPGVPVGKGRPRFVKATGRAYTPEKTASYESLIAYAASQAMRGAQPINAPIGI
CCEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE
KVQAVFPIPASWTKKRKESAVWHTSKPDGDNILKALGDALNGIVWADDSQVARTSIAKVY
EEEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHH
GDVPGLHVFVEALGV
CCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]