| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201018
Identifier: 87201018
GI number: 87201018
Start: 3224075
End: 3224398
Strand: Direct
Name: 87201018
Synonym: Saro_3006
Alternate gene names: NA
Gene position: 3224075-3224398 (Clockwise)
Preceding gene: 87200998
Following gene: 87201025
Centisome position: 90.52
GC content: 56.17
Gene sequence:
>324_bases ATGCCGCCAGGAGAATGGCTTGCCACCAGCAATGCGTTATCAAGGCGGGCATTCCACCGGAAAGGGGCAGTCTCGAAGGC GATGCAGTCCTCGATTATGTCCGTCTCTCGATTGGACAAGGCGCGATGCCTGCCGATCTCGGTCAGGATGCCGAGCATGA AATCGGTCTGGATGCAGATTTCACTCATGTTGCCCCTCCCCTTGTGGTCAATGCCTGTTCCAAATGAAGTCCACGGCGAA CCAAGCGATAATCGCAGGCCAGCAGGTGACGAAGAATGCGAAGTCGATCCATTCGCGGAAGCTCTCTGGCCAGCCTATCG ATAG
Upstream 100 bases:
>100_bases TCCGTTGCGCGCATCCTTGCGCTTTTGACGCTTCCGGAGGCGATGAAGGCGAGCGTAAGCCATACCTCCGGTAATCTCGT GACGACGGGCAAAGCGAGCG
Downstream 100 bases:
>100_bases GCTAAGGCTTGCAGAGAGGATTATCCCGAAGGTGAAGTATGCGAGGATCATCCGCCGACGCCCTCCATCCTGACTGCGGC AATGTCCGCACCGCTCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MPPGEWLATSNALSRRAFHRKGAVSKAMQSSIMSVSRLDKARCLPISVRMPSMKSVWMQISLMLPLPLWSMPVPNEVHGE PSDNRRPAGDEECEVDPFAEALWPAYR
Sequences:
>Translated_107_residues MPPGEWLATSNALSRRAFHRKGAVSKAMQSSIMSVSRLDKARCLPISVRMPSMKSVWMQISLMLPLPLWSMPVPNEVHGE PSDNRRPAGDEECEVDPFAEALWPAYR >Mature_106_residues PPGEWLATSNALSRRAFHRKGAVSKAMQSSIMSVSRLDKARCLPISVRMPSMKSVWMQISLMLPLPLWSMPVPNEVHGEP SDNRRPAGDEECEVDPFAEALWPAYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12021; Mature: 11890
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGEWLATSNALSRRAFHRKGAVSKAMQSSIMSVSRLDKARCLPISVRMPSMKSVWMQI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH SLMLPLPLWSMPVPNEVHGEPSDNRRPAGDEECEVDPFAEALWPAYR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure PPGEWLATSNALSRRAFHRKGAVSKAMQSSIMSVSRLDKARCLPISVRMPSMKSVWMQI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH SLMLPLPLWSMPVPNEVHGEPSDNRRPAGDEECEVDPFAEALWPAYR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA