| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201007
Identifier: 87201007
GI number: 87201007
Start: 3213004
End: 3213561
Strand: Reverse
Name: 87201007
Synonym: Saro_2995
Alternate gene names: NA
Gene position: 3213561-3213004 (Counterclockwise)
Preceding gene: 87201008
Following gene: 87201006
Centisome position: 90.23
GC content: 59.14
Gene sequence:
>558_bases ATGGCAGGCCTTAACGAGAGCAAGCGCCAGTTCGATATCACGCGTCAGGACTACGAGCCTTATCAGAACCTTGGCCGCGC GGCGATCCCCGAGCTTGGCGATCTTGTCGGCGTCAACGGGGGCGATGCTCAACAGGCAATCATCGATCAATTGAAGGCTG GCCCGCTTTACACCTCGCTTACCGGCGCGGGTGAAGAGTCCATCCTTGCCAATGCTTCGGCAACGGGCGGACTTCGCGGT GGAAATACTCAAGATGCCTTGGCGCGGTTCCGGGGCGATACGCTAAACTCTGTGATTGCCAATCAGCTTGCGCAGTATTC CGGCCTCGTCGGGATTGGCTCGGGCGCAACGGATGCTGTGTCGAACTTCGGTGCGGCGGCGGTCAATGCGCAGAACCAGC TCCGCAATCAGGGCGCAGGCGCAAAAGCGCAAGCAGTTCTCGCGAAGGCTGGCATCAATGCACAGAACTGGAGCAACGCA GGCGGCTTCCTTGATAGCGCAATAAGCAGCGTACTTCCCACCTCGGGGGTTGGCGGCTTCTTGAAGAAGCTATTCTGA
Upstream 100 bases:
>100_bases GGCTGTCATCGGCCTGTTTTCTTTCGTTGGGGGGCTGTTTGGCGGCGGCGGTCAGAAAAAGGCCGCTGATCGTGCTGCGC AGCTTCAATATGACGCGGCG
Downstream 100 bases:
>100_bases TGGCCGAGTTGGACTACGCCGCCATCATGAGGGCTGGCCAGTCGCTGGTCCCCGATATCCAGGAACAGATGTTCCTCAAC GATCAGCGCAAGATGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAGLNESKRQFDITRQDYEPYQNLGRAAIPELGDLVGVNGGDAQQAIIDQLKAGPLYTSLTGAGEESILANASATGGLRG GNTQDALARFRGDTLNSVIANQLAQYSGLVGIGSGATDAVSNFGAAAVNAQNQLRNQGAGAKAQAVLAKAGINAQNWSNA GGFLDSAISSVLPTSGVGGFLKKLF
Sequences:
>Translated_185_residues MAGLNESKRQFDITRQDYEPYQNLGRAAIPELGDLVGVNGGDAQQAIIDQLKAGPLYTSLTGAGEESILANASATGGLRG GNTQDALARFRGDTLNSVIANQLAQYSGLVGIGSGATDAVSNFGAAAVNAQNQLRNQGAGAKAQAVLAKAGINAQNWSNA GGFLDSAISSVLPTSGVGGFLKKLF >Mature_184_residues AGLNESKRQFDITRQDYEPYQNLGRAAIPELGDLVGVNGGDAQQAIIDQLKAGPLYTSLTGAGEESILANASATGGLRGG NTQDALARFRGDTLNSVIANQLAQYSGLVGIGSGATDAVSNFGAAAVNAQNQLRNQGAGAKAQAVLAKAGINAQNWSNAG GFLDSAISSVLPTSGVGGFLKKLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18798; Mature: 18667
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLNESKRQFDITRQDYEPYQNLGRAAIPELGDLVGVNGGDAQQAIIDQLKAGPLYTSL CCCCCCCHHHHCCCHHCCHHHHHCCHHHCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHH TGAGEESILANASATGGLRGGNTQDALARFRGDTLNSVIANQLAQYSGLVGIGSGATDAV CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCHHHH SNFGAAAVNAQNQLRNQGAGAKAQAVLAKAGINAQNWSNAGGFLDSAISSVLPTSGVGGF HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH LKKLF HHHHC >Mature Secondary Structure AGLNESKRQFDITRQDYEPYQNLGRAAIPELGDLVGVNGGDAQQAIIDQLKAGPLYTSL CCCCCCHHHHCCCHHCCHHHHHCCHHHCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEHH TGAGEESILANASATGGLRGGNTQDALARFRGDTLNSVIANQLAQYSGLVGIGSGATDAV CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCHHHH SNFGAAAVNAQNQLRNQGAGAKAQAVLAKAGINAQNWSNAGGFLDSAISSVLPTSGVGGF HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH LKKLF HHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA