| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200992
Identifier: 87200992
GI number: 87200992
Start: 3198559
End: 3199014
Strand: Direct
Name: 87200992
Synonym: Saro_2980
Alternate gene names: NA
Gene position: 3198559-3199014 (Clockwise)
Preceding gene: 87200991
Following gene: 87200993
Centisome position: 89.81
GC content: 60.31
Gene sequence:
>456_bases ATGCGCCCATCACTCCCATCGAAGGAACCCCCCATGACCAATAACAGGACCAAGCTGGAACAGTGGGCGGTGGAGTTGTT CCGCCGAGCCGTTGAAGCATACGGCGGGGAGTCAATTCCCGGTGAGACAGAATGCTACGCGGCAAGGGTCATTCAATCCG CATTCGAGGATCGTGAGCGGAAGCTGCGGGAAGCGTTGTGGACACCGCGGGAGGCAGCTTGGTCCGGTCTGGCCCGCGAC CTCATGTTGGCCTTCGATATGGGATGCAGGACGCCGCGCGAGATATTCCAGCACCTTGATCGATGCGGCAAGCCGATCCC GCAATGGCTTCGGGACGAAGGCGAAATGAAGCATCTAGACCATGTGCCCAGCAAGGGAACGCGGGCCGTAATCATCTACC GCGCGATGCTTGAACCGGCGATGGAAGCCCTCAAGGCGACCCCCGATGCTCAGTGA
Upstream 100 bases:
>100_bases CGCGTTGGTGATACGCGATGGGACACGCCTAACTGGTGCCCTGCCGTAAACATGCCGGGACTGAAGGCAGCGGAAGCACT CTACAACAGTCTGATCGTGG
Downstream 100 bases:
>100_bases AGCGATGAAGGCGGAAGGGTGGATCGAGCATGATGGCGGCGAATGTCCAATAGACGGCAAAATTCGTGTCACCATGCTGT TCCGCAACGGCACAGAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRPSLPSKEPPMTNNRTKLEQWAVELFRRAVEAYGGESIPGETECYAARVIQSAFEDRERKLREALWTPREAAWSGLARD LMLAFDMGCRTPREIFQHLDRCGKPIPQWLRDEGEMKHLDHVPSKGTRAVIIYRAMLEPAMEALKATPDAQ
Sequences:
>Translated_151_residues MRPSLPSKEPPMTNNRTKLEQWAVELFRRAVEAYGGESIPGETECYAARVIQSAFEDRERKLREALWTPREAAWSGLARD LMLAFDMGCRTPREIFQHLDRCGKPIPQWLRDEGEMKHLDHVPSKGTRAVIIYRAMLEPAMEALKATPDAQ >Mature_151_residues MRPSLPSKEPPMTNNRTKLEQWAVELFRRAVEAYGGESIPGETECYAARVIQSAFEDRERKLREALWTPREAAWSGLARD LMLAFDMGCRTPREIFQHLDRCGKPIPQWLRDEGEMKHLDHVPSKGTRAVIIYRAMLEPAMEALKATPDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17323; Mature: 17323
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00226 IF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSLPSKEPPMTNNRTKLEQWAVELFRRAVEAYGGESIPGETECYAARVIQSAFEDRER CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KLREALWTPREAAWSGLARDLMLAFDMGCRTPREIFQHLDRCGKPIPQWLRDEGEMKHLD HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHH HVPSKGTRAVIIYRAMLEPAMEALKATPDAQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRPSLPSKEPPMTNNRTKLEQWAVELFRRAVEAYGGESIPGETECYAARVIQSAFEDRER CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KLREALWTPREAAWSGLARDLMLAFDMGCRTPREIFQHLDRCGKPIPQWLRDEGEMKHLD HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHH HVPSKGTRAVIIYRAMLEPAMEALKATPDAQ CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA