Click here to switch to the map view.

The map label for this gene is 87200967

Identifier: 87200967

GI number: 87200967

Start: 3173489

End: 3174241

Strand: Reverse

Name: 87200967

Synonym: Saro_2955

Alternate gene names: NA

Gene position: 3174241-3173489 (Counterclockwise)

Preceding gene: 87200969

Following gene: 87200966

Centisome position: 89.12

GC content: 64.41

Gene sequence:

>753_bases
ATGTCCAGGATTTCTCGTTTCCTTTCAACGACGTTGGCCGTCACGACATTGGCGGGGGCAACGCTTCCGACAGTGGCCGA
GGCGCATGGCATCTGGTTTGCCCAGCGCGCACGCCAGCTCGCGCTAGTCTATGGCGTCGGTGCCGACGACCTCGACGCGG
TGAAGCGCCTGCCGCTTATCAAGGCGGTCAAGGGCTTCGACGCCGACGGGCTGCCGGTGAACACGTCCCTGCGCGCTGCG
GGCGCCATTCCCGTCGTAGACAGTGACGAGCCGGTGGCCATCGTCGCGGCGGAAATGGACTACGGCATCTGGAGCAAGGA
CGCTTCGGGCGAATGGCACAACAAGGGCCGCGACGAGGTGCCCGGTGCGACCGTCAGCGAGCACAACTTCAAGTATGCCG
TGCACCTGACCCAGCTTCCCACCAAGCCGGTGCCGCTCATCCAAGGGCACAGGTTGCAGCTCGTGCCGGCGACGACGGTG
ATCCCGCAGAAGATGGGCGAGCCGATCAAGGTCCGCGCCTTCTACGACGGCCAGCCGATGGCAGGCGTGCAGGTCATGGC
CGACTACGTCAACGATCCCGATCAGATCGCGCCCAGGACCGATGCCGAAGGCTATGCGACCATTCCCGTGCGCAACCAGG
GCATCAATGTGCTGATGGCGATCTTCGTCGGGCCGAGCGACAATCCGGCCAAGTACGAGCGCATGGAATACCGTGCCTCG
CTTTCCTTCGTGCTGCCGCACCTGCCGGAATGA

Upstream 100 bases:

>100_bases
CATGCTGGGCTGGCCGCATCTTCGATATGATCCGCTGCCCCGCGTGCATAAGCTGGTCGCATCGGACCATGTCCTTGCCT
GCCCCTCTCGGAGATTGCGG

Downstream 100 bases:

>100_bases
CCGGTCCTTCGGGGAGAACTGCAATGAACGCCAAGTCCATCCTTACCGCTCTTGCCGGCATCGCGCTCGTCGCCGTGCCC
GTTGCCGTCAGCGCGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSRISRFLSTTLAVTTLAGATLPTVAEAHGIWFAQRARQLALVYGVGADDLDAVKRLPLIKAVKGFDADGLPVNTSLRAA
GAIPVVDSDEPVAIVAAEMDYGIWSKDASGEWHNKGRDEVPGATVSEHNFKYAVHLTQLPTKPVPLIQGHRLQLVPATTV
IPQKMGEPIKVRAFYDGQPMAGVQVMADYVNDPDQIAPRTDAEGYATIPVRNQGINVLMAIFVGPSDNPAKYERMEYRAS
LSFVLPHLPE

Sequences:

>Translated_250_residues
MSRISRFLSTTLAVTTLAGATLPTVAEAHGIWFAQRARQLALVYGVGADDLDAVKRLPLIKAVKGFDADGLPVNTSLRAA
GAIPVVDSDEPVAIVAAEMDYGIWSKDASGEWHNKGRDEVPGATVSEHNFKYAVHLTQLPTKPVPLIQGHRLQLVPATTV
IPQKMGEPIKVRAFYDGQPMAGVQVMADYVNDPDQIAPRTDAEGYATIPVRNQGINVLMAIFVGPSDNPAKYERMEYRAS
LSFVLPHLPE
>Mature_249_residues
SRISRFLSTTLAVTTLAGATLPTVAEAHGIWFAQRARQLALVYGVGADDLDAVKRLPLIKAVKGFDADGLPVNTSLRAAG
AIPVVDSDEPVAIVAAEMDYGIWSKDASGEWHNKGRDEVPGATVSEHNFKYAVHLTQLPTKPVPLIQGHRLQLVPATTVI
PQKMGEPIKVRAFYDGQPMAGVQVMADYVNDPDQIAPRTDAEGYATIPVRNQGINVLMAIFVGPSDNPAKYERMEYRASL
SFVLPHLPE

Specific function: Unknown

COG id: COG5266

COG function: function code P; ABC-type Co2+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27066; Mature: 26935

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRISRFLSTTLAVTTLAGATLPTVAEAHGIWFAQRARQLALVYGVGADDLDAVKRLPLI
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHCEEEEEEECCCCCHHHHHHCHHH
KAVKGFDADGLPVNTSLRAAGAIPVVDSDEPVAIVAAEMDYGIWSKDASGEWHNKGRDEV
HHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCC
PGATVSEHNFKYAVHLTQLPTKPVPLIQGHRLQLVPATTVIPQKMGEPIKVRAFYDGQPM
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHCCCCEEEEEEECCCCC
AGVQVMADYVNDPDQIAPRTDAEGYATIPVRNQGINVLMAIFVGPSDNPAKYERMEYRAS
CHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHH
LSFVLPHLPE
HEEECCCCCC
>Mature Secondary Structure 
SRISRFLSTTLAVTTLAGATLPTVAEAHGIWFAQRARQLALVYGVGADDLDAVKRLPLI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHCEEEEEEECCCCCHHHHHHCHHH
KAVKGFDADGLPVNTSLRAAGAIPVVDSDEPVAIVAAEMDYGIWSKDASGEWHNKGRDEV
HHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCC
PGATVSEHNFKYAVHLTQLPTKPVPLIQGHRLQLVPATTVIPQKMGEPIKVRAFYDGQPM
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHCCCCEEEEEEECCCCC
AGVQVMADYVNDPDQIAPRTDAEGYATIPVRNQGINVLMAIFVGPSDNPAKYERMEYRAS
CHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHH
LSFVLPHLPE
HEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA