| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200966
Identifier: 87200966
GI number: 87200966
Start: 3173082
End: 3173465
Strand: Reverse
Name: 87200966
Synonym: Saro_2954
Alternate gene names: NA
Gene position: 3173465-3173082 (Counterclockwise)
Preceding gene: 87200967
Following gene: 87200965
Centisome position: 89.1
GC content: 67.45
Gene sequence:
>384_bases ATGAACGCCAAGTCCATCCTTACCGCTCTTGCCGGCATCGCGCTCGTCGCCGTGCCCGTTGCCGTCAGCGCGCATGGCTC GATGAAGCCCAGCCACGGCGGCGTGGTTACCATGTCGGGCGAGATCATGGTCGAACTGGTTCGCGGCCCCAGGGGCGTCG ACGTCTATGTCAGCGAGGAGGACGAGCCCATTGCCGCGTCGGGCCTGAATGCCAAGCTGACCGTGACGGCTGCCGGCGCG AAGAAGGACGCGCCGCTCGTCGCGCAGGCCGGCAACAAGCTGTCGGCTCCCGGGCTCAAGGTCCCGGCGGGCGCCAAGGT GGTCGTCTCGCTGGTCGACAAGCGCGACGGCGCCAAGACCTTCGCCACCTTCAACGTGAAGTGA
Upstream 100 bases:
>100_bases GCGACAATCCGGCCAAGTACGAGCGCATGGAATACCGTGCCTCGCTTTCCTTCGTGCTGCCGCACCTGCCGGAATGACCG GTCCTTCGGGGAGAACTGCA
Downstream 100 bases:
>100_bases TCCGATTATGGTCCGCCCCGCCCTTTCGCTCCCGACCGGAATTTTGCGATGGGCCGGGTGGGCCGTCGCGCTTCTGGTGA TCGTTGCGCTGCGCTCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNAKSILTALAGIALVAVPVAVSAHGSMKPSHGGVVTMSGEIMVELVRGPRGVDVYVSEEDEPIAASGLNAKLTVTAAGA KKDAPLVAQAGNKLSAPGLKVPAGAKVVVSLVDKRDGAKTFATFNVK
Sequences:
>Translated_127_residues MNAKSILTALAGIALVAVPVAVSAHGSMKPSHGGVVTMSGEIMVELVRGPRGVDVYVSEEDEPIAASGLNAKLTVTAAGA KKDAPLVAQAGNKLSAPGLKVPAGAKVVVSLVDKRDGAKTFATFNVK >Mature_127_residues MNAKSILTALAGIALVAVPVAVSAHGSMKPSHGGVVTMSGEIMVELVRGPRGVDVYVSEEDEPIAASGLNAKLTVTAAGA KKDAPLVAQAGNKLSAPGLKVPAGAKVVVSLVDKRDGAKTFATFNVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12731; Mature: 12731
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKSILTALAGIALVAVPVAVSAHGSMKPSHGGVVTMSGEIMVELVRGPRGVDVYVSEE CCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCC DEPIAASGLNAKLTVTAAGAKKDAPLVAQAGNKLSAPGLKVPAGAKVVVSLVDKRDGAKT CCCEEECCCCEEEEEEECCCCCCCCEEECCCCCCCCCCEECCCCCEEEEEEECCCCCCCE FATFNVK EEEEECC >Mature Secondary Structure MNAKSILTALAGIALVAVPVAVSAHGSMKPSHGGVVTMSGEIMVELVRGPRGVDVYVSEE CCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCC DEPIAASGLNAKLTVTAAGAKKDAPLVAQAGNKLSAPGLKVPAGAKVVVSLVDKRDGAKT CCCEEECCCCEEEEEEECCCCCCCCEEECCCCCCCCCCEECCCCCEEEEEEECCCCCCCE FATFNVK EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA