Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200963

Identifier: 87200963

GI number: 87200963

Start: 3170469

End: 3171677

Strand: Reverse

Name: 87200963

Synonym: Saro_2951

Alternate gene names: NA

Gene position: 3171677-3170469 (Counterclockwise)

Preceding gene: 87200964

Following gene: 87200962

Centisome position: 89.05

GC content: 63.94

Gene sequence:

>1209_bases
ATGACTACGCTAGCCGCAGAGGCACCACCATTCGCGCCGGCCGCGACCCCCGCCAATCCCGCCGTTGCCAGAACCCGTCT
CCTGGCGATCGACGCGCTGCGCGGCCTGGTCATGCTGTTCATGCTGGTCGATCACGTCCGCGAGACGTTCTTCCTGCACC
TGCAGGTGACGGACCCGGTCGATGCCAACACGACGGACCCGGGCCTGTTCTTCACGCGCCTGCTGTCCACGTTCTGCGCG
CCGACGTTCGTCGCGCTGACGGGCTTGTCGGCATGGCTTTACGGTCAGTCGCACACCAAGAAGGAAGTCAGCGAGTTCCT
GTTGAAGCGGGGGCTGTTCCTGATCTTCCTTGAACTCACGGTCATCTGCCTGGCCTGGCCGACGCAGAGCTTCGAGTTTC
CGCCGGAGCGCTTCTGGCTTCAGGTGATCTGGGCCATCGGCATCTCGATGGTCGCGCTTTCGGGCCTGATCTACCTGCCG
CGCCCCGCACAGTTCGCTGTCGGCCTTGCGATCGTGTGCCTGCACAACCTGCTCGACGGCATCGTCCTGGCGCCCGGCGA
CAGCGGCTATGCGCTGTGGGCCGTGCTGCACCAGCGCTCGGTCATCGACCTTGGCATGGGGCTTACGGCGAAGACGACTT
ACCCCGTGCTGCCGTGGATCGGCGTGATCCTGCTTGGCTATGCGTGCGGACCGTGGTTCCGCAAGGGCAGCGATCCGGCG
GTCCGCCTGCGGCGCCTGGTCACGCTGGGCGTGGCGATGATCGTGGGCTTCCTCGTGATCCGCTACCTCAACTTCTACGG
TGACAAGCCCTGGTTCGTCGCCGAAACCCAGCTGCGCACGGTGATGAGCTTCCTTTCGCTGACCAAGTATCCGCCTTCGC
TGCTGTTCCTGCTGCCGACCGTGGGCACCGGCGTGCTGCTGCTGGCACTGTTCGAGAAGTTCCAGGACAGCCCCGCGCTG
CCGCACCTCGCCTACCTCGGCGGTGCACCCATGTTCTTCTACATCCTGCACCTCTACGTGCTGAAGGGCATCTATCACGT
GGCCCTGGCCATGTACGGCCCGGTCAAGGGCACCGTATTCGGCGTCGACAACCTTTCGACCGTATGGATCTGGGTGTTCC
TGCTGATCGTGCCGCTTTACTTGCCGACCCGCTGGTTTGCCGGTGTAAAGCAGCGTCGCAAGGACATCTGGTGGCTCAAG
TACCTGTAA

Upstream 100 bases:

>100_bases
CCGGTGACGGTAAAGGTCCGCACGGTCGGGTTCTACAAGGACCTGTTCCTGCCCAAGGGCGAATGACCGGGCCGCAAGAC
GAGAGGGGAAGGACCAAACC

Downstream 100 bases:

>100_bases
TTTAGGTCAATCGCAGCATGGCAGGGGGCCGGGAGCAATGCTTCCGGCCCTTTCTGCATGCGCAACCGCCGAAAATGCGG
CGATTTGGGGACGGCACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTTLAAEAPPFAPAATPANPAVARTRLLAIDALRGLVMLFMLVDHVRETFFLHLQVTDPVDANTTDPGLFFTRLLSTFCA
PTFVALTGLSAWLYGQSHTKKEVSEFLLKRGLFLIFLELTVICLAWPTQSFEFPPERFWLQVIWAIGISMVALSGLIYLP
RPAQFAVGLAIVCLHNLLDGIVLAPGDSGYALWAVLHQRSVIDLGMGLTAKTTYPVLPWIGVILLGYACGPWFRKGSDPA
VRLRRLVTLGVAMIVGFLVIRYLNFYGDKPWFVAETQLRTVMSFLSLTKYPPSLLFLLPTVGTGVLLLALFEKFQDSPAL
PHLAYLGGAPMFFYILHLYVLKGIYHVALAMYGPVKGTVFGVDNLSTVWIWVFLLIVPLYLPTRWFAGVKQRRKDIWWLK
YL

Sequences:

>Translated_402_residues
MTTLAAEAPPFAPAATPANPAVARTRLLAIDALRGLVMLFMLVDHVRETFFLHLQVTDPVDANTTDPGLFFTRLLSTFCA
PTFVALTGLSAWLYGQSHTKKEVSEFLLKRGLFLIFLELTVICLAWPTQSFEFPPERFWLQVIWAIGISMVALSGLIYLP
RPAQFAVGLAIVCLHNLLDGIVLAPGDSGYALWAVLHQRSVIDLGMGLTAKTTYPVLPWIGVILLGYACGPWFRKGSDPA
VRLRRLVTLGVAMIVGFLVIRYLNFYGDKPWFVAETQLRTVMSFLSLTKYPPSLLFLLPTVGTGVLLLALFEKFQDSPAL
PHLAYLGGAPMFFYILHLYVLKGIYHVALAMYGPVKGTVFGVDNLSTVWIWVFLLIVPLYLPTRWFAGVKQRRKDIWWLK
YL
>Mature_401_residues
TTLAAEAPPFAPAATPANPAVARTRLLAIDALRGLVMLFMLVDHVRETFFLHLQVTDPVDANTTDPGLFFTRLLSTFCAP
TFVALTGLSAWLYGQSHTKKEVSEFLLKRGLFLIFLELTVICLAWPTQSFEFPPERFWLQVIWAIGISMVALSGLIYLPR
PAQFAVGLAIVCLHNLLDGIVLAPGDSGYALWAVLHQRSVIDLGMGLTAKTTYPVLPWIGVILLGYACGPWFRKGSDPAV
RLRRLVTLGVAMIVGFLVIRYLNFYGDKPWFVAETQLRTVMSFLSLTKYPPSLLFLLPTVGTGVLLLALFEKFQDSPALP
HLAYLGGAPMFFYILHLYVLKGIYHVALAMYGPVKGTVFGVDNLSTVWIWVFLLIVPLYLPTRWFAGVKQRRKDIWWLKY
L

Specific function: Unknown

COG id: COG3503

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44940; Mature: 44809

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLAAEAPPFAPAATPANPAVARTRLLAIDALRGLVMLFMLVDHVRETFFLHLQVTDPV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
DANTTDPGLFFTRLLSTFCAPTFVALTGLSAWLYGQSHTKKEVSEFLLKRGLFLIFLELT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VICLAWPTQSFEFPPERFWLQVIWAIGISMVALSGLIYLPRPAQFAVGLAIVCLHNLLDG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHCC
IVLAPGDSGYALWAVLHQRSVIDLGMGLTAKTTYPVLPWIGVILLGYACGPWFRKGSDPA
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHH
VRLRRLVTLGVAMIVGFLVIRYLNFYGDKPWFVAETQLRTVMSFLSLTKYPPSLLFLLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHH
VGTGVLLLALFEKFQDSPALPHLAYLGGAPMFFYILHLYVLKGIYHVALAMYGPVKGTVF
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
GVDNLSTVWIWVFLLIVPLYLPTRWFAGVKQRRKDIWWLKYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure 
TTLAAEAPPFAPAATPANPAVARTRLLAIDALRGLVMLFMLVDHVRETFFLHLQVTDPV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
DANTTDPGLFFTRLLSTFCAPTFVALTGLSAWLYGQSHTKKEVSEFLLKRGLFLIFLELT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VICLAWPTQSFEFPPERFWLQVIWAIGISMVALSGLIYLPRPAQFAVGLAIVCLHNLLDG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHCC
IVLAPGDSGYALWAVLHQRSVIDLGMGLTAKTTYPVLPWIGVILLGYACGPWFRKGSDPA
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHH
VRLRRLVTLGVAMIVGFLVIRYLNFYGDKPWFVAETQLRTVMSFLSLTKYPPSLLFLLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHH
VGTGVLLLALFEKFQDSPALPHLAYLGGAPMFFYILHLYVLKGIYHVALAMYGPVKGTVF
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
GVDNLSTVWIWVFLLIVPLYLPTRWFAGVKQRRKDIWWLKYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA