Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200961

Identifier: 87200961

GI number: 87200961

Start: 3166923

End: 3167936

Strand: Reverse

Name: 87200961

Synonym: Saro_2949

Alternate gene names: NA

Gene position: 3167936-3166923 (Counterclockwise)

Preceding gene: 87200962

Following gene: 87200960

Centisome position: 88.95

GC content: 66.67

Gene sequence:

>1014_bases
ATGCGCCGCAACGGTTTTCTCGCCTGGCACCGTCGTCTTGCCCTGATCTTCGCGCCTTTGCTGCTGCTTCAGGCGCTGAC
CGGCGCGGTGCTCGTTTTCCACGACGACCTCGTCGCTCTGATAGATCCGGCTCCTGCTGGCGTTTCCCGGGTTCCGGTCT
CCACGCTTGTCGCTTCGGCACAAGCCTCGGGCGGGCGCGTGACCCGTCTTTTCCTTCCCGCCCGCCAGGATGGACCGGCC
TTTGCGCAGCTTGCCGAGGGGGACGGCGCGACCCGCTACGCCGTGCTCGATCCCAACTCAGGCCGGGTGATGCGCGAAGG
AGGCTTGCTGGCGTTTCCGGTCGAAGCCGCGCTGCAATGGCATTACCGCCTGATGGATGGAGCCACGGGCCTTGCCATCG
TCGCCTTGAACGGACTGGCTCTGGTCGTCCTCGCATCGAGCGGTCTCGCCTTCTGGTGGCCGGCAGGCGGACGCTGGAGG
AAGTCTCTTTCCGTGAACGCGCGCATGCCCGCGCGGGTCCGTCTGCGGCAATGGCATCGCAGCTTTGGCGTGGTTGCCTC
GGCCGTCATTCTGATGAGCGCGGCGACCGGCATTCTCCTTTCGGCGCCCGACGTCTTCGCAGGGGCTGTCGTGCCTTCGC
GGCAGGTGCCGCCGCCCCGGCCGCCGGCGCAGATCGATGCTGCCGTGGGCCTTGCACGCTCCGCGTTTCCCCGCAGCGAG
TTGCGCGACATCCGCTTCCCGTTGGCCGACCGCATCGACGTCAATCTGAACGCTCCGGAGCGCAATCCCCGCGCCGTTCA
TGTCGTGACCGTCGCGGTTTCTCAGCCGAAAGTGCTGAAGGCGGTGCCTGCAAATGAAAGCGCTGCGCTGTGGATGACCG
TGCTGCCGCTTCACACGGGCGAAGGCTTCGGTCCGCTGGGGCGCTGGTTCGTCCTTGTCGAGGCGCTCGTGCTGGCGGTT
CTTTCCATCACCGGCCCCGTCATGTGGTGGCAGGCAAGAAGGCTGCGCAAATGA

Upstream 100 bases:

>100_bases
GCGCCGCGCGCGTTCAATGTCCGGGCGACCTTCTCGTTCTGACTTGATACCTCATGGGGCTACCGCTCGTCGGTAGCCCC
AGTTTCCTTGGGCAGGGACC

Downstream 100 bases:

>100_bases
CCATGCTCTATCACGGCCCCGAAGCGCGCGGCGCGATCTGGGCCGATATCTTTGCCCGCAGGCTGCCGGACGTCCCGTTC
CGCCGCTGGAGCGAGGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRRNGFLAWHRRLALIFAPLLLLQALTGAVLVFHDDLVALIDPAPAGVSRVPVSTLVASAQASGGRVTRLFLPARQDGPA
FAQLAEGDGATRYAVLDPNSGRVMREGGLLAFPVEAALQWHYRLMDGATGLAIVALNGLALVVLASSGLAFWWPAGGRWR
KSLSVNARMPARVRLRQWHRSFGVVASAVILMSAATGILLSAPDVFAGAVVPSRQVPPPRPPAQIDAAVGLARSAFPRSE
LRDIRFPLADRIDVNLNAPERNPRAVHVVTVAVSQPKVLKAVPANESAALWMTVLPLHTGEGFGPLGRWFVLVEALVLAV
LSITGPVMWWQARRLRK

Sequences:

>Translated_337_residues
MRRNGFLAWHRRLALIFAPLLLLQALTGAVLVFHDDLVALIDPAPAGVSRVPVSTLVASAQASGGRVTRLFLPARQDGPA
FAQLAEGDGATRYAVLDPNSGRVMREGGLLAFPVEAALQWHYRLMDGATGLAIVALNGLALVVLASSGLAFWWPAGGRWR
KSLSVNARMPARVRLRQWHRSFGVVASAVILMSAATGILLSAPDVFAGAVVPSRQVPPPRPPAQIDAAVGLARSAFPRSE
LRDIRFPLADRIDVNLNAPERNPRAVHVVTVAVSQPKVLKAVPANESAALWMTVLPLHTGEGFGPLGRWFVLVEALVLAV
LSITGPVMWWQARRLRK
>Mature_337_residues
MRRNGFLAWHRRLALIFAPLLLLQALTGAVLVFHDDLVALIDPAPAGVSRVPVSTLVASAQASGGRVTRLFLPARQDGPA
FAQLAEGDGATRYAVLDPNSGRVMREGGLLAFPVEAALQWHYRLMDGATGLAIVALNGLALVVLASSGLAFWWPAGGRWR
KSLSVNARMPARVRLRQWHRSFGVVASAVILMSAATGILLSAPDVFAGAVVPSRQVPPPRPPAQIDAAVGLARSAFPRSE
LRDIRFPLADRIDVNLNAPERNPRAVHVVTVAVSQPKVLKAVPANESAALWMTVLPLHTGEGFGPLGRWFVLVEALVLAV
LSITGPVMWWQARRLRK

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36228; Mature: 36228

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNGFLAWHRRLALIFAPLLLLQALTGAVLVFHDDLVALIDPAPAGVSRVPVSTLVASA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHH
QASGGRVTRLFLPARQDGPAFAQLAEGDGATRYAVLDPNSGRVMREGGLLAFPVEAALQW
CCCCCEEEEEEEECCCCCCHHHEECCCCCCEEEEEECCCCCCEEECCCEEEEEHHHHHHH
HYRLMDGATGLAIVALNGLALVVLASSGLAFWWPAGGRWRKSLSVNARMPARVRLRQWHR
HHHHHCCCCCEEEEEECCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
SFGVVASAVILMSAATGILLSAPDVFAGAVVPSRQVPPPRPPAQIDAAVGLARSAFPRSE
HHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
LRDIRFPLADRIDVNLNAPERNPRAVHVVTVAVSQPKVLKAVPANESAALWMTVLPLHTG
HHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEEEEECC
EGFGPLGRWFVLVEALVLAVLSITGPVMWWQARRLRK
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MRRNGFLAWHRRLALIFAPLLLLQALTGAVLVFHDDLVALIDPAPAGVSRVPVSTLVASA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHH
QASGGRVTRLFLPARQDGPAFAQLAEGDGATRYAVLDPNSGRVMREGGLLAFPVEAALQW
CCCCCEEEEEEEECCCCCCHHHEECCCCCCEEEEEECCCCCCEEECCCEEEEEHHHHHHH
HYRLMDGATGLAIVALNGLALVVLASSGLAFWWPAGGRWRKSLSVNARMPARVRLRQWHR
HHHHHCCCCCEEEEEECCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
SFGVVASAVILMSAATGILLSAPDVFAGAVVPSRQVPPPRPPAQIDAAVGLARSAFPRSE
HHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
LRDIRFPLADRIDVNLNAPERNPRAVHVVTVAVSQPKVLKAVPANESAALWMTVLPLHTG
HHHCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCCCCEEEEEEEEEECC
EGFGPLGRWFVLVEALVLAVLSITGPVMWWQARRLRK
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA