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The map label for this gene is ooxB [H]

Identifier: 87200951

GI number: 87200951

Start: 3155971

End: 3157107

Strand: Reverse

Name: ooxB [H]

Synonym: Saro_2939

Alternate gene names: 87200951

Gene position: 3157107-3155971 (Counterclockwise)

Preceding gene: 87200952

Following gene: 87200949

Centisome position: 88.64

GC content: 67.37

Gene sequence:

>1137_bases
ATGACCGCTCCCGAAATCACTGCCGACGTCGCCATCATCGGCGGCGGGTTGATGGGCTGCTCGGCCGCTTTCTTCCTGCG
CCAGCGGGGGCTGTCTGTCGTCCTGCTCGAAACCGACAAGGTTGGCCGCCAGGCCAGCGGCACCAACTTCGGCAACGTCC
GTCGCCAGGGCCGTCCCATCTTCCAGCTCCCGCTCGCCAACCGCGCAAGCCGCATATGGCGGCAGGCCAACGAACTGCTG
GGAAGCGATGTCGAGTATCTGCAGAACGGCCACATCCGCGTCTGCTTCCGCGAGCGGCCGGAAAACGTCGGCAAGATGGA
GGAATACGCGGCCCAGGCGCGAGAGGAGGGGCTCGATCTCGAACTCCTTTCGGGCAACGTGCTGCGCGAACGCTTCCCCT
TTCTAGGCCCTGACGTCATCGCCGGCTCCCACTCTGCGCTCGACGGGCACGCCAACCCCCGACTTGCCGCTCCGGCCTTT
GCCCGCGCCGCGATGAAGCTGGGCGCGCACGTGGTCGAGGACACCCGTATCGTCCACGCCGCCAAGATCGGCGAGGACTT
CGTGCTCGAGGCTGCCGACGGTCGCCGCTTCCGCGCGCCGACGCTGCTCGTCACCGCGGGGGCGTGGGCGGGCAAGATCG
TCTGCCAGTTCGACGAGCCGGTGAAGCTCACGCCGCGCGCGCCCACGATGAGCGTGACCGAGCCGGTGCCCTACTCGATC
CTCCCCGCGGTGGGCGTGATGACGCCTGATGAGGTGGAGACGGTCTATTTCCGCCAGGTCGCGCGCGGCAACGTGATCCT
CGGCGGATCGACCCGTGCGCCATCCTACCCGGATGAGTACCGCTCCTACGTCATGCCGCAGAATACGATGACCCAGTTCC
AGCACTTGCGCCGCCTCGCGCCGGCGCTGGCGAACCTTCAGGTCATCCGGGTCTGGAGCGGCATCGAGGGCTATACCGAC
GATGGCCAGCCGGTGATGGGCCCCAGCGCCACGGTGCCGGGCCTGTTCTACGCGTTCGGCTTCTCGGGTTCGGGCTTCCA
GATCGGTCCGGGCGTGGGCGAGACGATGGCTGAAGTCATTGCCACCGGCCACACCGACATTCCGCTCGATCCCTACTCGA
TCAAGCGCTTCGCCTGA

Upstream 100 bases:

>100_bases
TCGTCTCGGCCCTGCGCGGCGAGCCGGTCGAGTGCGCCGGACGCCTTCGCGGGCAGGCGCCGGTCAAGCCCATTCCCGTC
GCCACGGCGAGGACCGACAC

Downstream 100 bases:

>100_bases
TGCGGCGGCCCCGTTCTCCAGAGGGATGAACGGGGCGCGCTTGTTCAGATCTGGATCAGCGCCGTCTTCACCTTGCACGA
TCCGAGATAGGCTTCGCGGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Octopine oxidase subunit B [H]

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTAPEITADVAIIGGGLMGCSAAFFLRQRGLSVVLLETDKVGRQASGTNFGNVRRQGRPIFQLPLANRASRIWRQANELL
GSDVEYLQNGHIRVCFRERPENVGKMEEYAAQAREEGLDLELLSGNVLRERFPFLGPDVIAGSHSALDGHANPRLAAPAF
ARAAMKLGAHVVEDTRIVHAAKIGEDFVLEAADGRRFRAPTLLVTAGAWAGKIVCQFDEPVKLTPRAPTMSVTEPVPYSI
LPAVGVMTPDEVETVYFRQVARGNVILGGSTRAPSYPDEYRSYVMPQNTMTQFQHLRRLAPALANLQVIRVWSGIEGYTD
DGQPVMGPSATVPGLFYAFGFSGSGFQIGPGVGETMAEVIATGHTDIPLDPYSIKRFA

Sequences:

>Translated_378_residues
MTAPEITADVAIIGGGLMGCSAAFFLRQRGLSVVLLETDKVGRQASGTNFGNVRRQGRPIFQLPLANRASRIWRQANELL
GSDVEYLQNGHIRVCFRERPENVGKMEEYAAQAREEGLDLELLSGNVLRERFPFLGPDVIAGSHSALDGHANPRLAAPAF
ARAAMKLGAHVVEDTRIVHAAKIGEDFVLEAADGRRFRAPTLLVTAGAWAGKIVCQFDEPVKLTPRAPTMSVTEPVPYSI
LPAVGVMTPDEVETVYFRQVARGNVILGGSTRAPSYPDEYRSYVMPQNTMTQFQHLRRLAPALANLQVIRVWSGIEGYTD
DGQPVMGPSATVPGLFYAFGFSGSGFQIGPGVGETMAEVIATGHTDIPLDPYSIKRFA
>Mature_377_residues
TAPEITADVAIIGGGLMGCSAAFFLRQRGLSVVLLETDKVGRQASGTNFGNVRRQGRPIFQLPLANRASRIWRQANELLG
SDVEYLQNGHIRVCFRERPENVGKMEEYAAQAREEGLDLELLSGNVLRERFPFLGPDVIAGSHSALDGHANPRLAAPAFA
RAAMKLGAHVVEDTRIVHAAKIGEDFVLEAADGRRFRAPTLLVTAGAWAGKIVCQFDEPVKLTPRAPTMSVTEPVPYSIL
PAVGVMTPDEVETVYFRQVARGNVILGGSTRAPSYPDEYRSYVMPQNTMTQFQHLRRLAPALANLQVIRVWSGIEGYTDD
GQPVMGPSATVPGLFYAFGFSGSGFQIGPGVGETMAEVIATGHTDIPLDPYSIKRFA

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI197927446, Length=394, Percent_Identity=25.3807106598985, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI21361378, Length=394, Percent_Identity=25.3807106598985, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI194306651, Length=390, Percent_Identity=25.1282051282051, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI24797151, Length=388, Percent_Identity=25.2577319587629, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1787559, Length=384, Percent_Identity=25.2604166666667, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI20130091, Length=393, Percent_Identity=26.4631043256997, Blast_Score=122, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40995; Mature: 40864

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPEITADVAIIGGGLMGCSAAFFLRQRGLSVVLLETDKVGRQASGTNFGNVRRQGRPI
CCCCCCEECEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCE
FQLPLANRASRIWRQANELLGSDVEYLQNGHIRVCFRERPENVGKMEEYAAQAREEGLDL
EEECCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCE
ELLSGNVLRERFPFLGPDVIAGSHSALDGHANPRLAAPAFARAAMKLGAHVVEDTRIVHA
EEECCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEH
AKIGEDFVLEAADGRRFRAPTLLVTAGAWAGKIVCQFDEPVKLTPRAPTMSVTEPVPYSI
HHCCCCEEEECCCCCEEECCEEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHH
LPAVGVMTPDEVETVYFRQVARGNVILGGSTRAPSYPDEYRSYVMPQNTMTQFQHLRRLA
HHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
PALANLQVIRVWSGIEGYTDDGQPVMGPSATVPGLFYAFGFSGSGFQIGPGVGETMAEVI
HHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCEEECCCCHHHHHHHH
ATGHTDIPLDPYSIKRFA
HCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
TAPEITADVAIIGGGLMGCSAAFFLRQRGLSVVLLETDKVGRQASGTNFGNVRRQGRPI
CCCCCEECEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCE
FQLPLANRASRIWRQANELLGSDVEYLQNGHIRVCFRERPENVGKMEEYAAQAREEGLDL
EEECCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCE
ELLSGNVLRERFPFLGPDVIAGSHSALDGHANPRLAAPAFARAAMKLGAHVVEDTRIVHA
EEECCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEH
AKIGEDFVLEAADGRRFRAPTLLVTAGAWAGKIVCQFDEPVKLTPRAPTMSVTEPVPYSI
HHCCCCEEEECCCCCEEECCEEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCHHH
LPAVGVMTPDEVETVYFRQVARGNVILGGSTRAPSYPDEYRSYVMPQNTMTQFQHLRRLA
HHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
PALANLQVIRVWSGIEGYTDDGQPVMGPSATVPGLFYAFGFSGSGFQIGPGVGETMAEVI
HHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCEEECCCCHHHHHHHH
ATGHTDIPLDPYSIKRFA
HCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]