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The map label for this gene is paiB [H]

Identifier: 87200851

GI number: 87200851

Start: 3064606

End: 3065208

Strand: Direct

Name: paiB [H]

Synonym: Saro_2838

Alternate gene names: 87200851

Gene position: 3064606-3065208 (Clockwise)

Preceding gene: 87200850

Following gene: 87200852

Centisome position: 86.05

GC content: 68.49

Gene sequence:

>603_bases
ATGCATCCCAATCCCGCGTTTCGCCATGAAGACCGGGCGCTGCTGGAAGCGCTGATTGCCGAGATCGGGTTCGGCATGGT
CTTCGCGGCGACCGCAGACGGCCCCCGGGTGGCGCATGTGCCGCTGCACTACACCGGCGACGGCGCGGTGCAATTCCACC
TTGCCCGGGGCAACGCGCTGGTGCGCCATATCGATGGCGCGACCGCGCTGGTCGTGATCAACGGGCCGGACGGCTATGTC
AGCCCGCGCTGGTACGCCGACGCGGCGCAGGTGCCGACGTGGAACTACGTCGCGCTCGAACTCGAAGGCCGCGTGCGGCG
CATGGACCAGGACGGGCTGGAGGCGCTGCTGGAAACCCTTTCGGCAACGAACGAGGCGCGGATCGTCGAGGGCGAGCCCT
GGACAATGGACAAGACCCCGCCCGACACGCTGCGCAAGCTGATGGGCGCCATCGTCGGCTTCGAACTGGAAATCATGGCC
TGGCGCCCCACCTTCAAGCTTTCGCAGAACAAGGGCGCGGACGAGCGCGCCCGCGTCGCGGCGGGGCTCGAGGCCGAAGG
TTCGCCGGCGATTGCCGAACTGATGCGGAGGCTGGTGCCGTGA

Upstream 100 bases:

>100_bases
GGGCGAAGAAGCCGGCAGCCAGGACGACGGCCGGGGGCAAGCCCGCGCGCGCCGCCGCGCCGCGCAAGCCCGCTGGTCCG
CCCAAGGCCAAGGGGGGCTG

Downstream 100 bases:

>100_bases
GGACCCTGCGATGAGACTGGCGATTTTCGATTGCGACGGCACGCTGGTCGACAGCCAGGCCGACATCTGCGCGGCGATGG
ACGCGGCGTTTGCCGCAGCC

Product: negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MHPNPAFRHEDRALLEALIAEIGFGMVFAATADGPRVAHVPLHYTGDGAVQFHLARGNALVRHIDGATALVVINGPDGYV
SPRWYADAAQVPTWNYVALELEGRVRRMDQDGLEALLETLSATNEARIVEGEPWTMDKTPPDTLRKLMGAIVGFELEIMA
WRPTFKLSQNKGADERARVAAGLEAEGSPAIAELMRRLVP

Sequences:

>Translated_200_residues
MHPNPAFRHEDRALLEALIAEIGFGMVFAATADGPRVAHVPLHYTGDGAVQFHLARGNALVRHIDGATALVVINGPDGYV
SPRWYADAAQVPTWNYVALELEGRVRRMDQDGLEALLETLSATNEARIVEGEPWTMDKTPPDTLRKLMGAIVGFELEIMA
WRPTFKLSQNKGADERARVAAGLEAEGSPAIAELMRRLVP
>Mature_200_residues
MHPNPAFRHEDRALLEALIAEIGFGMVFAATADGPRVAHVPLHYTGDGAVQFHLARGNALVRHIDGATALVVINGPDGYV
SPRWYADAAQVPTWNYVALELEGRVRRMDQDGLEALLETLSATNEARIVEGEPWTMDKTPPDTLRKLMGAIVGFELEIMA
WRPTFKLSQNKGADERARVAAGLEAEGSPAIAELMRRLVP

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 21889; Mature: 21889

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPNPAFRHEDRALLEALIAEIGFGMVFAATADGPRVAHVPLHYTGDGAVQFHLARGNAL
CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCEE
VRHIDGATALVVINGPDGYVSPRWYADAAQVPTWNYVALELEGRVRRMDQDGLEALLETL
EEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHH
SATNEARIVEGEPWTMDKTPPDTLRKLMGAIVGFELEIMAWRPTFKLSQNKGADERARVA
HCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEEEEECCCEEECCCCCCCHHHHHH
AGLEAEGSPAIAELMRRLVP
CCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MHPNPAFRHEDRALLEALIAEIGFGMVFAATADGPRVAHVPLHYTGDGAVQFHLARGNAL
CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCEE
VRHIDGATALVVINGPDGYVSPRWYADAAQVPTWNYVALELEGRVRRMDQDGLEALLETL
EEEECCCEEEEEEECCCCCCCCCEECCCCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHH
SATNEARIVEGEPWTMDKTPPDTLRKLMGAIVGFELEIMAWRPTFKLSQNKGADERARVA
HCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEEEEECCCEEECCCCCCCHHHHHH
AGLEAEGSPAIAELMRRLVP
CCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]