| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ysgA [C]
Identifier: 87200819
GI number: 87200819
Start: 3030486
End: 3031349
Strand: Direct
Name: ysgA [C]
Synonym: Saro_2806
Alternate gene names: 87200819
Gene position: 3030486-3031349 (Clockwise)
Preceding gene: 87200817
Following gene: 87200830
Centisome position: 85.09
GC content: 68.17
Gene sequence:
>864_bases ATGTGCGATGAATTCACCGAAGCCGAAAACGACCAGTGGGCCCTGAACCGCCGCGAATTTGCCGCGATCGGCGCCGGAGT GGCCGCGCTCGCCGCCTTGCCCGGCTGCGCGACGGCGGGCGAATCGGCCACCGCCAGCCGCGACGTGGTGATCGACACGC CGCACGGAAAGGCCGACGCCTTCTTCGTCTACCCCAGGAAGGGCAGACATGCGGCCGTCATCATGTGGCCCGACATCGCC GGCCTGCGCGATGCCTACAAGACCATGGGCACCCGCCTTGCCGCCGCCGGTTACGCCGTGCTGGTGGTGAACCAGTACTA CCGCTCCAGCCCCGCCCCGATCCTGGGCTCGCTGATGGAATGGCGGTCCGACGCGGGGCAGAAGAAGCTCAAACCGATGA TCGCGGCGATCACACCCTCGGGCACGGTGTCGGATGCCGCGGCCTTCGTCGCCTGGCTCGATGGCCAGAAGGAAGTCCAC ACCAGGAAGAAGATCGGCTCGTGCGGCTATTGCATGGGCGGCCCCTTCGCCGTGCGCACCGCCTTCGCAAGCCCCGCCCG CGTCGGCGCCGCCGCCTCGTTCCACGGCGCCGGCCTCGTCGGCCCCGAGCCCGATGCCCCGATCAACCTGCTGGCAAAGA CGAGCGCCGCCTATCTCATAGCCATCGCCCAGAACGACGACGAACGCGCGCCAAAGGAAAAGACCCAGCTCCGCAAGGCC GCCGATGCCGCCCGGCGCCCCGCCGAAATCGAGGTATACCCCGCCCAGCACGGCTGGTGCACCATAGACGCTCCGATCTA CGATCGCACCCAGGCGGAAAAGGCGTGGGGGCGGATGCTGGCGCTGTTCAAGGCGAATCTGTGA
Upstream 100 bases:
>100_bases ACGCCGAACGCGAGAGGAAAAATGAGGCCTCGGGACACCTTGCCTGCGGATCGCCGCGCTGTACTCTCTTTGCACACAGG CCAGACAGGGAACGCTCCCC
Downstream 100 bases:
>100_bases AGGTGCGGGACGGCTTTCGCGCGATTGCGCTGTGAAAGCCGCCGTTCCGGTCACGACAACTTGGCGGACGTGAACGCCAC CGCAACGCAACACGTTCGTC
Product: dienelactone hydrolase
Products: oxohex-2-enedioate [C]
Alternate protein names: Hydrolase; Carboxymethylenebutenolidase; Alanine Rich Hydrolase; Dienelactone Hydrolase Family Hydrolase; Dienelactone Hydrolase Protein; Dienelactone Hydrolase Family Protein; Dienelactone Hydrolase Domain Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MCDEFTEAENDQWALNRREFAAIGAGVAALAALPGCATAGESATASRDVVIDTPHGKADAFFVYPRKGRHAAVIMWPDIA GLRDAYKTMGTRLAAAGYAVLVVNQYYRSSPAPILGSLMEWRSDAGQKKLKPMIAAITPSGTVSDAAAFVAWLDGQKEVH TRKKIGSCGYCMGGPFAVRTAFASPARVGAAASFHGAGLVGPEPDAPINLLAKTSAAYLIAIAQNDDERAPKEKTQLRKA ADAARRPAEIEVYPAQHGWCTIDAPIYDRTQAEKAWGRMLALFKANL
Sequences:
>Translated_287_residues MCDEFTEAENDQWALNRREFAAIGAGVAALAALPGCATAGESATASRDVVIDTPHGKADAFFVYPRKGRHAAVIMWPDIA GLRDAYKTMGTRLAAAGYAVLVVNQYYRSSPAPILGSLMEWRSDAGQKKLKPMIAAITPSGTVSDAAAFVAWLDGQKEVH TRKKIGSCGYCMGGPFAVRTAFASPARVGAAASFHGAGLVGPEPDAPINLLAKTSAAYLIAIAQNDDERAPKEKTQLRKA ADAARRPAEIEVYPAQHGWCTIDAPIYDRTQAEKAWGRMLALFKANL >Mature_287_residues MCDEFTEAENDQWALNRREFAAIGAGVAALAALPGCATAGESATASRDVVIDTPHGKADAFFVYPRKGRHAAVIMWPDIA GLRDAYKTMGTRLAAAGYAVLVVNQYYRSSPAPILGSLMEWRSDAGQKKLKPMIAAITPSGTVSDAAAFVAWLDGQKEVH TRKKIGSCGYCMGGPFAVRTAFASPARVGAAASFHGAGLVGPEPDAPINLLAKTSAAYLIAIAQNDDERAPKEKTQLRKA ADAARRPAEIEVYPAQHGWCTIDAPIYDRTQAEKAWGRMLALFKANL
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.45 [C]
Molecular weight: Translated: 30595; Mature: 30595
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDEFTEAENDQWALNRREFAAIGAGVAALAALPGCATAGESATASRDVVIDTPHGKADA CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCE FFVYPRKGRHAAVIMWPDIAGLRDAYKTMGTRLAAAGYAVLVVNQYYRSSPAPILGSLME EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCHHHHHHHH WRSDAGQKKLKPMIAAITPSGTVSDAAAFVAWLDGQKEVHTRKKIGSCGYCMGGPFAVRT HHHCCCHHHHHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH AFASPARVGAAASFHGAGLVGPEPDAPINLLAKTSAAYLIAIAQNDDERAPKEKTQLRKA HHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHH ADAARRPAEIEVYPAQHGWCTIDAPIYDRTQAEKAWGRMLALFKANL HHHHCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCDEFTEAENDQWALNRREFAAIGAGVAALAALPGCATAGESATASRDVVIDTPHGKADA CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCE FFVYPRKGRHAAVIMWPDIAGLRDAYKTMGTRLAAAGYAVLVVNQYYRSSPAPILGSLME EEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCHHHHHHHH WRSDAGQKKLKPMIAAITPSGTVSDAAAFVAWLDGQKEVHTRKKIGSCGYCMGGPFAVRT HHHCCCHHHHHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH AFASPARVGAAASFHGAGLVGPEPDAPINLLAKTSAAYLIAIAQNDDERAPKEKTQLRKA HHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHH ADAARRPAEIEVYPAQHGWCTIDAPIYDRTQAEKAWGRMLALFKANL HHHHCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]
Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA