| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200818
Identifier: 87200818
GI number: 87200818
Start: 3029605
End: 3030336
Strand: Reverse
Name: 87200818
Synonym: Saro_2805
Alternate gene names: NA
Gene position: 3030336-3029605 (Counterclockwise)
Preceding gene: 87200820
Following gene: 87200816
Centisome position: 85.08
GC content: 63.66
Gene sequence:
>732_bases ATGACCGATGTGAACGCCAGTAGCGAAAGCCGTCTGGCCGCGCTCGAAGCGCGCGTGACCGAGCTGGAGGACCTCAACGC GATCCGCCGGTTGCAGTGGGCCTATGGCTACTACATCGACTACAACCGGCCCGAGGAAGTGGCGGGGCTGTTCGCGAAGG ATGGCGCGGTCGTGTTCCTTTCCGGCGAATATGTCGGCTACGAAGGGGTGATGCGGCTCTACGGAACCTGGTTCCAGAAC CTGTTCACCGGCGGGCGACGCGGGCCGGTGCATGGCCTGCTGCTCGACCATTTCCAGTTGCAGGACGTGATCACCATCGC GCCCGATGGCCAGACCGCCAAGGGCCGTTTCCGGGGCATCCTTGCGGGCGGGTGGCATGACGACATCGTCAAGGACAAGC CCGAGGGCATGCCGCAGCAGTTCTGGGAAAGCGGCATCTACGAGAACGACTACGTCAAGGAAGACGGGGTCTGGAAGATC AAGCGGCTGGACTACATGATGCAGTGGCAGGCCGACTACGAGACCGGTTGGTCCAAGACCATCGCGCATCTCCAGCCGGC GGCAGTGTGCTTCCCCGAGAACCCGATCGGGCCTGACCGCCTGTTGCCCGAAACGGAAGTGCGCCAGACCTGGCCGCACC GCGCCGAAGTGCCGATGAGCTTTGCCCACCCGGTTCTGGCCAAGGCCTTTGCCGTGGGCGAGTTCACCAAGCTTCAGAAG AAGTGGCCCTGA
Upstream 100 bases:
>100_bases ATCCGCAGGCAAGGTGTCCCGAGGCCTCATTTTTCCTCTCGCGTTCGGCGTGATATTTGTTAGTGTTGCTTACAAATTAC CGACTTGGGAGAGTCTGACG
Downstream 100 bases:
>100_bases GCGCCTGAGGCGCGGGCCTAGCCGCCCCAGCGTCCGATGCGGGCGAGGACGGATGCCGCGACGCGGCGGAAGGCCTCGCG GTCGCGCTGGGGCACGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTDVNASSESRLAALEARVTELEDLNAIRRLQWAYGYYIDYNRPEEVAGLFAKDGAVVFLSGEYVGYEGVMRLYGTWFQN LFTGGRRGPVHGLLLDHFQLQDVITIAPDGQTAKGRFRGILAGGWHDDIVKDKPEGMPQQFWESGIYENDYVKEDGVWKI KRLDYMMQWQADYETGWSKTIAHLQPAAVCFPENPIGPDRLLPETEVRQTWPHRAEVPMSFAHPVLAKAFAVGEFTKLQK KWP
Sequences:
>Translated_243_residues MTDVNASSESRLAALEARVTELEDLNAIRRLQWAYGYYIDYNRPEEVAGLFAKDGAVVFLSGEYVGYEGVMRLYGTWFQN LFTGGRRGPVHGLLLDHFQLQDVITIAPDGQTAKGRFRGILAGGWHDDIVKDKPEGMPQQFWESGIYENDYVKEDGVWKI KRLDYMMQWQADYETGWSKTIAHLQPAAVCFPENPIGPDRLLPETEVRQTWPHRAEVPMSFAHPVLAKAFAVGEFTKLQK KWP >Mature_242_residues TDVNASSESRLAALEARVTELEDLNAIRRLQWAYGYYIDYNRPEEVAGLFAKDGAVVFLSGEYVGYEGVMRLYGTWFQNL FTGGRRGPVHGLLLDHFQLQDVITIAPDGQTAKGRFRGILAGGWHDDIVKDKPEGMPQQFWESGIYENDYVKEDGVWKIK RLDYMMQWQADYETGWSKTIAHLQPAAVCFPENPIGPDRLLPETEVRQTWPHRAEVPMSFAHPVLAKAFAVGEFTKLQKK WP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27728; Mature: 27596
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVNASSESRLAALEARVTELEDLNAIRRLQWAYGYYIDYNRPEEVAGLFAKDGAVVFL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHEEECCCEEEEE SGEYVGYEGVMRLYGTWFQNLFTGGRRGPVHGLLLDHFQLQDVITIAPDGQTAKGRFRGI ECCEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECEEEEECCCCCCCCCCEEEE LAGGWHDDIVKDKPEGMPQQFWESGIYENDYVKEDGVWKIKRLDYMMQWQADYETGWSKT EECCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCHHHH IAHLQPAAVCFPENPIGPDRLLPETEVRQTWPHRAEVPMSFAHPVLAKAFAVGEFTKLQK HHHCCCCEEECCCCCCCHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KWP CCC >Mature Secondary Structure TDVNASSESRLAALEARVTELEDLNAIRRLQWAYGYYIDYNRPEEVAGLFAKDGAVVFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHEEECCCEEEEE SGEYVGYEGVMRLYGTWFQNLFTGGRRGPVHGLLLDHFQLQDVITIAPDGQTAKGRFRGI ECCEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECEEEEECCCCCCCCCCEEEE LAGGWHDDIVKDKPEGMPQQFWESGIYENDYVKEDGVWKIKRLDYMMQWQADYETGWSKT EECCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCHHHH IAHLQPAAVCFPENPIGPDRLLPETEVRQTWPHRAEVPMSFAHPVLAKAFAVGEFTKLQK HHHCCCCEEECCCCCCCHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KWP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA