| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200801
Identifier: 87200801
GI number: 87200801
Start: 3008163
End: 3009053
Strand: Direct
Name: 87200801
Synonym: Saro_2788
Alternate gene names: NA
Gene position: 3008163-3009053 (Clockwise)
Preceding gene: 87200800
Following gene: 87200804
Centisome position: 84.46
GC content: 71.16
Gene sequence:
>891_bases ATGCAGGAAACCGGCTACAGCCAAGGCGCGACGGCGCGACCCCGCCAGACCGGCGGCATGCGCGCGCGCGGCGTTGCAGC TCTCGTTGCGGGATGTCTTCTGGCAGGTGCCGCCGGCGCCGCGTGGCTCGGCTGGCGCAACGGCTTCGTCGATCTCCAGA TGAGCGACGGCGTGCCGCACATCGTCACCCCGCAGGATGCCCCGCCGCCGCCGCCGGCACCGGTCGTGGACTCTGCCGCC CAGGCCCAGCTCGCCGATACCGGCACCAAGATCGCCATGCTCGAACAGCGACTGGCCGAACTCAACCAGCAGGCGCTCGC AGCGTCGGGCAACGCCACTCGCGCGGAAACGCTGCTTCTCGCCTTTGCCGCCCGCCGTGCGGTGGAACGCGGCCAGCCGC TCGGCTGGATCGAAGCCCAGCTCCGCGCCCGCTTCGGGCAAACCCAGGGCGCTGCGGTGGACCGAGTGATCGCGGCCGGC TCGATGCCCGTCACCCTTCCCCAGCTCACCGAACAGTTCGAGCTCCTCGCCCCCGAACTCGCGGGCGGCTCGCCCGACGA AGGCACCTGGACCTGGTTCAAGCGGCAGGTGTCGGATCTTTTCGTCGTCCGGCACGACGACATGCCGTCGCCCGCGCCCG AAAACCGGGTCGACCGGGCCCGCGCGTTCCTTGCCGGCGGCAAGGTCGAAGCCGCAGTCGCCGAAGTGGAACGGATGCCG GGGCGCGAAAGTGCATCGGAATGGCTCGCCCACGCACGCGACTACATGGCGACCCAGCGCGCGCTCGACCAGCTCGAAGC TGCGGCGCTGATGGCCGGGCAACCCGTCGCGGCAATCCCGCCCGCCGATGAAGAGACTCCGGCACCCGAAGGCTCCGCAC CCGCGATCTGA
Upstream 100 bases:
>100_bases TGCGCATCGCTGACTCAAGAACGGACTCCGATCTGCTGGAACTAGGCCGGCGAATGTGCCAGACCATGTGACTTCGGGGC GACAGGACAAGCGAAAACGG
Downstream 100 bases:
>100_bases AGTCCCCGCGCTCTGGCCTCTCTCAGGCCGCGCGAAGCAGCTTGGGCAAGTCGCCGCTCATCCCGCGTGCCTCGTCCATG AACCAGCGCTTGAGCGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MQETGYSQGATARPRQTGGMRARGVAALVAGCLLAGAAGAAWLGWRNGFVDLQMSDGVPHIVTPQDAPPPPPAPVVDSAA QAQLADTGTKIAMLEQRLAELNQQALAASGNATRAETLLLAFAARRAVERGQPLGWIEAQLRARFGQTQGAAVDRVIAAG SMPVTLPQLTEQFELLAPELAGGSPDEGTWTWFKRQVSDLFVVRHDDMPSPAPENRVDRARAFLAGGKVEAAVAEVERMP GRESASEWLAHARDYMATQRALDQLEAAALMAGQPVAAIPPADEETPAPEGSAPAI
Sequences:
>Translated_296_residues MQETGYSQGATARPRQTGGMRARGVAALVAGCLLAGAAGAAWLGWRNGFVDLQMSDGVPHIVTPQDAPPPPPAPVVDSAA QAQLADTGTKIAMLEQRLAELNQQALAASGNATRAETLLLAFAARRAVERGQPLGWIEAQLRARFGQTQGAAVDRVIAAG SMPVTLPQLTEQFELLAPELAGGSPDEGTWTWFKRQVSDLFVVRHDDMPSPAPENRVDRARAFLAGGKVEAAVAEVERMP GRESASEWLAHARDYMATQRALDQLEAAALMAGQPVAAIPPADEETPAPEGSAPAI >Mature_296_residues MQETGYSQGATARPRQTGGMRARGVAALVAGCLLAGAAGAAWLGWRNGFVDLQMSDGVPHIVTPQDAPPPPPAPVVDSAA QAQLADTGTKIAMLEQRLAELNQQALAASGNATRAETLLLAFAARRAVERGQPLGWIEAQLRARFGQTQGAAVDRVIAAG SMPVTLPQLTEQFELLAPELAGGSPDEGTWTWFKRQVSDLFVVRHDDMPSPAPENRVDRARAFLAGGKVEAAVAEVERMP GRESASEWLAHARDYMATQRALDQLEAAALMAGQPVAAIPPADEETPAPEGSAPAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31136; Mature: 31136
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQETGYSQGATARPRQTGGMRARGVAALVAGCLLAGAAGAAWLGWRNGFVDLQMSDGVPH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCE IVTPQDAPPPPPAPVVDSAAQAQLADTGTKIAMLEQRLAELNQQALAASGNATRAETLLL EECCCCCCCCCCCCHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AFAARRAVERGQPLGWIEAQLRARFGQTQGAAVDRVIAAGSMPVTLPQLTEQFELLAPEL HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AGGSPDEGTWTWFKRQVSDLFVVRHDDMPSPAPENRVDRARAFLAGGKVEAAVAEVERMP CCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC GRESASEWLAHARDYMATQRALDQLEAAALMAGQPVAAIPPADEETPAPEGSAPAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQETGYSQGATARPRQTGGMRARGVAALVAGCLLAGAAGAAWLGWRNGFVDLQMSDGVPH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCE IVTPQDAPPPPPAPVVDSAAQAQLADTGTKIAMLEQRLAELNQQALAASGNATRAETLLL EECCCCCCCCCCCCHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AFAARRAVERGQPLGWIEAQLRARFGQTQGAAVDRVIAAGSMPVTLPQLTEQFELLAPEL HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AGGSPDEGTWTWFKRQVSDLFVVRHDDMPSPAPENRVDRARAFLAGGKVEAAVAEVERMP CCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC GRESASEWLAHARDYMATQRALDQLEAAALMAGQPVAAIPPADEETPAPEGSAPAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA