| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200794
Identifier: 87200794
GI number: 87200794
Start: 3001869
End: 3002333
Strand: Direct
Name: 87200794
Synonym: Saro_2781
Alternate gene names: NA
Gene position: 3001869-3002333 (Clockwise)
Preceding gene: 87200793
Following gene: 87200799
Centisome position: 84.28
GC content: 69.89
Gene sequence:
>465_bases ATGACCTTGCCTGAAGGTGAGGCCCTGCCCGGGGTGCGCGACAGCGCGGCACCGGCAAGCTGGGCCTCCTCGGTCGACGG ACTTTCCGCGCGTTTCGGCCATCCGGGAGAGCAGCCGCTGGTCTCGGTCGCCTGCCGCCAGGGTGTGCTGGTCGTAACGC GGCACGCCGCTGCCCCGATCGGCGCGCAGGCGCTTTTTGCACTGGTCGGAAGCGAGGGGATCATGCGGCTGCCCGTCGAT GCGACGGCGGTACCGGGTCAGCGCGGCTATATCTGGCAAGGCACAATGGCTGCCGACGATACGCGGGCAAAGGTGCTGGG CGGATCGTACACCGGGACGCTTCCCGGCGCGGGCATGATCAAGGTTTCGGGCGGCGGGCCGGTGCGTGATCTCGTCGCGC GATGCCGCCGCTCTGCGCCAACAGACGCGCCGGAGCCAGTGGCCCCGGCGCAAGCGATGGAATAG
Upstream 100 bases:
>100_bases TTCAATCCTGGCAGCATCAATCGTCGCCCTCTCCCTCACCGCCTGCTCGAAATCACCGACCCCGCCCCCGCGCGAGGGGG CGCCGGAGAATGCCGTGCGG
Downstream 100 bases:
>100_bases TCAGAGCTTCCCGAAACGGGCTTCGTAGGCGGCGGTATCGCCCGCCGCGAGCAGCGCGGCCTGTTCGACCCAGCTGTCGC GCTTGGCACGGCCGGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTLPEGEALPGVRDSAAPASWASSVDGLSARFGHPGEQPLVSVACRQGVLVVTRHAAAPIGAQALFALVGSEGIMRLPVD ATAVPGQRGYIWQGTMAADDTRAKVLGGSYTGTLPGAGMIKVSGGGPVRDLVARCRRSAPTDAPEPVAPAQAME
Sequences:
>Translated_154_residues MTLPEGEALPGVRDSAAPASWASSVDGLSARFGHPGEQPLVSVACRQGVLVVTRHAAAPIGAQALFALVGSEGIMRLPVD ATAVPGQRGYIWQGTMAADDTRAKVLGGSYTGTLPGAGMIKVSGGGPVRDLVARCRRSAPTDAPEPVAPAQAME >Mature_153_residues TLPEGEALPGVRDSAAPASWASSVDGLSARFGHPGEQPLVSVACRQGVLVVTRHAAAPIGAQALFALVGSEGIMRLPVDA TAVPGQRGYIWQGTMAADDTRAKVLGGSYTGTLPGAGMIKVSGGGPVRDLVARCRRSAPTDAPEPVAPAQAME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15613; Mature: 15482
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPEGEALPGVRDSAAPASWASSVDGLSARFGHPGEQPLVSVACRQGVLVVTRHAAAPI CCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCC GAQALFALVGSEGIMRLPVDATAVPGQRGYIWQGTMAADDTRAKVLGGSYTGTLPGAGMI CHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCEE KVSGGGPVRDLVARCRRSAPTDAPEPVAPAQAME EECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLPEGEALPGVRDSAAPASWASSVDGLSARFGHPGEQPLVSVACRQGVLVVTRHAAAPI CCCCCCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCC GAQALFALVGSEGIMRLPVDATAVPGQRGYIWQGTMAADDTRAKVLGGSYTGTLPGAGMI CHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCEE KVSGGGPVRDLVARCRRSAPTDAPEPVAPAQAME EECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA