| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200777
Identifier: 87200777
GI number: 87200777
Start: 2984217
End: 2984681
Strand: Direct
Name: 87200777
Synonym: Saro_2764
Alternate gene names: NA
Gene position: 2984217-2984681 (Clockwise)
Preceding gene: 87200776
Following gene: 87200778
Centisome position: 83.79
GC content: 64.52
Gene sequence:
>465_bases ATGACCAGACCACCTCTCCCGCCGTTTGACGGAGCCAGTGCCATCGAAAAGGTGCGCCTCGCCGAGGACGGCTGGAACAG CCGCGACCCAGCACGGGTGGCGCAGGCCTACACGCCAGACAGCCGCTGGCGCAATCGTGCCGAATTCTTCACCGGGCGCG ACCATGTCGAGGCATTCCTGCGCCGCAAGTGGGACCGCGAACTCGATTATCGCCTGATCAAGGAGCTCTGGGCCTTCACC GGCAACCGCATCGCGGTGCGCTATGCCTACGAGTACCACGACGACAGCGGCCAGTGGTTCCGCGCCTATGGCAACGAGAA CTGGGAGTTCGCCGAGGACGGCTTGATGCGCGCACGTCATAGCAGCATCAACGAACACCCGATCCGCGAAGAGGAGCGAA AGTTCCACTGGCCGCTCGGCCGTCGGCCGGACGATCATCCCGGCCTCAGCCACTTCGGCTTCTGA
Upstream 100 bases:
>100_bases GCGAAGTTCTGCTGTGTTGCGCTGTCCCTGCCGAAGGGAACGACAAGCCGCTTCAGGTCGAAGCGTGACCCCAAACTCAT TTCCAACGAAGGAGCCTGCC
Downstream 100 bases:
>100_bases TGCGCAGGCTGGCCCGCCTTTGCCAAGGCATCGCTGAACGACTAGGCTCGCAGAGCAGGGCGCCAGGGCCGGACTATCTC GGTGCCCTGCTCGACAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTRPPLPPFDGASAIEKVRLAEDGWNSRDPARVAQAYTPDSRWRNRAEFFTGRDHVEAFLRRKWDRELDYRLIKELWAFT GNRIAVRYAYEYHDDSGQWFRAYGNENWEFAEDGLMRARHSSINEHPIREEERKFHWPLGRRPDDHPGLSHFGF
Sequences:
>Translated_154_residues MTRPPLPPFDGASAIEKVRLAEDGWNSRDPARVAQAYTPDSRWRNRAEFFTGRDHVEAFLRRKWDRELDYRLIKELWAFT GNRIAVRYAYEYHDDSGQWFRAYGNENWEFAEDGLMRARHSSINEHPIREEERKFHWPLGRRPDDHPGLSHFGF >Mature_153_residues TRPPLPPFDGASAIEKVRLAEDGWNSRDPARVAQAYTPDSRWRNRAEFFTGRDHVEAFLRRKWDRELDYRLIKELWAFTG NRIAVRYAYEYHDDSGQWFRAYGNENWEFAEDGLMRARHSSINEHPIREEERKFHWPLGRRPDDHPGLSHFGF
Specific function: Unknown
COG id: COG3558
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18449; Mature: 18317
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPPLPPFDGASAIEKVRLAEDGWNSRDPARVAQAYTPDSRWRNRAEFFTGRDHVEAFL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH RRKWDRELDYRLIKELWAFTGNRIAVRYAYEYHDDSGQWFRAYGNENWEFAEDGLMRARH HHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHH SSINEHPIREEERKFHWPLGRRPDDHPGLSHFGF CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRPPLPPFDGASAIEKVRLAEDGWNSRDPARVAQAYTPDSRWRNRAEFFTGRDHVEAFL CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH RRKWDRELDYRLIKELWAFTGNRIAVRYAYEYHDDSGQWFRAYGNENWEFAEDGLMRARH HHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHH SSINEHPIREEERKFHWPLGRRPDDHPGLSHFGF CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA