| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200750
Identifier: 87200750
GI number: 87200750
Start: 2963025
End: 2963579
Strand: Direct
Name: 87200750
Synonym: Saro_2737
Alternate gene names: NA
Gene position: 2963025-2963579 (Clockwise)
Preceding gene: 87200749
Following gene: 87200751
Centisome position: 83.19
GC content: 62.88
Gene sequence:
>555_bases ATGCCCTCGTACCGCGAAAGCTTCGTGTTCTACATCGATACCCCAGATCCGGCTGTATTCTGGTCCGGCGTCGGCCCGCT CCTTCTTGCGGCCGATGCCGTGGTCCCGAGCCCGATAATCATCATGGGCGCAGGGCAGCTTGTCGACATTCCCGCTCTGG AGCAGCTGATCAACGGCAAGGCGCAGCGTCTCGAAGTTACACTGTCGGGCGTCAGCGAGGAAACAGTCGCGCTTGCTGCC GAAGAGGCCCCTACCATACCGGGGGCACCGGTTTACATCGGCCGGATCGAGTTCGACGAAAACTGGCAGGTCGTGGCCAT CGAATGGGAATGGACCGGTCAGGGCATCGGGCTATCGGTGAGCAGTCAGGACAGCAGCGGCCTGCGTGTTCGAAGCCTCG TTCTGACGATCGGCGCTGGTGACACCTCACGTCGTCGGTCGGCCTTTGCCTACTTCACCGATGCCGACCAGCGCTACGAC TTCCCGGACGACGCTGTGTTCAGCAACGTCGGGGGCATCTCGCAGGGCACGACCCGTCGCTGGGGGCCGAACTGA
Upstream 100 bases:
>100_bases AAATCCTGCGCCAGGCCGCCGCGATGGACGGCCAGACTGCGCAAGCAGTCCTCAAGGCCGCGCCGGGCCGGATGAGCCAG TACCAGCGGGACAAAATCTG
Downstream 100 bases:
>100_bases TGCCGGATCTGGGCGACTTCCTCGTTGCAGCCTCGCATCGCAAACATCGCTACGGCGAATGGGATTGCTGCACGTTCCCG GCAGACTGGTGCATCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPSYRESFVFYIDTPDPAVFWSGVGPLLLAADAVVPSPIIIMGAGQLVDIPALEQLINGKAQRLEVTLSGVSEETVALAA EEAPTIPGAPVYIGRIEFDENWQVVAIEWEWTGQGIGLSVSSQDSSGLRVRSLVLTIGAGDTSRRRSAFAYFTDADQRYD FPDDAVFSNVGGISQGTTRRWGPN
Sequences:
>Translated_184_residues MPSYRESFVFYIDTPDPAVFWSGVGPLLLAADAVVPSPIIIMGAGQLVDIPALEQLINGKAQRLEVTLSGVSEETVALAA EEAPTIPGAPVYIGRIEFDENWQVVAIEWEWTGQGIGLSVSSQDSSGLRVRSLVLTIGAGDTSRRRSAFAYFTDADQRYD FPDDAVFSNVGGISQGTTRRWGPN >Mature_183_residues PSYRESFVFYIDTPDPAVFWSGVGPLLLAADAVVPSPIIIMGAGQLVDIPALEQLINGKAQRLEVTLSGVSEETVALAAE EAPTIPGAPVYIGRIEFDENWQVVAIEWEWTGQGIGLSVSSQDSSGLRVRSLVLTIGAGDTSRRRSAFAYFTDADQRYDF PDDAVFSNVGGISQGTTRRWGPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19837; Mature: 19706
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYRESFVFYIDTPDPAVFWSGVGPLLLAADAVVPSPIIIMGAGQLVDIPALEQLINGK CCCCCCEEEEEEECCCCEEEECCCCHHHEEECCCCCCCEEEEECCCEEECHHHHHHHCCC AQRLEVTLSGVSEETVALAAEEAPTIPGAPVYIGRIEFDENWQVVAIEWEWTGQGIGLSV CEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCEEEEE SSQDSSGLRVRSLVLTIGAGDTSRRRSAFAYFTDADQRYDFPDDAVFSNVGGISQGTTRR CCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCC WGPN CCCC >Mature Secondary Structure PSYRESFVFYIDTPDPAVFWSGVGPLLLAADAVVPSPIIIMGAGQLVDIPALEQLINGK CCCCCEEEEEEECCCCEEEECCCCHHHEEECCCCCCCEEEEECCCEEECHHHHHHHCCC AQRLEVTLSGVSEETVALAAEEAPTIPGAPVYIGRIEFDENWQVVAIEWEWTGQGIGLSV CEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCCCEEEEE SSQDSSGLRVRSLVLTIGAGDTSRRRSAFAYFTDADQRYDFPDDAVFSNVGGISQGTTRR CCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCC WGPN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA