| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200749
Identifier: 87200749
GI number: 87200749
Start: 2960755
End: 2963025
Strand: Direct
Name: 87200749
Synonym: Saro_2736
Alternate gene names: NA
Gene position: 2960755-2963025 (Clockwise)
Preceding gene: 87200748
Following gene: 87200750
Centisome position: 83.13
GC content: 65.26
Gene sequence:
>2271_bases ATGCCAGAGATCGATCCCGTCATTCTGCAGCTTCAGGCGGACCTGAAGCAGTATCGCTCTGACCTCACCGGCGCCCAGAG GCTCACCGAAACGAAGCTCGCCGCCATCGAGGCTCGCGGCGTCGCGATGGGGCAGAACATCCGCAAGGGCTTTGACCTCG CGAAGGGCGCGGCGATTGGCTTCCTCGCAACGGTCAGTGTCGACGCGCTGACACAGGCGGCCAAGCGCGGCCTCGATTAT GCATCCAGCCTCGGGGAAGTTGCGCAGCAACTCGGCGTAACCACGGACGCGCTTCAGGAATATCGCTACGCCGCGTCGCA GGCTGGTCTTTCCCAGGAGGAAATGGACCAGGCGCTGTCGCAGCTCACCCGCCGCATTGGCGAGGCAGCGAGCGGGACAA AGGCGCAGGCCGAGGCCTTCACGAAGCTCGGCATCTCGGTCAAGGACGCGAACGGGAACGTCATGGACGCCGGTCGGGCG ATCCCCATGATCGCCGATGCGCTGCAAAAGATCGAGAGCCCGGCCGAGCGCGCCGCGATCCTCATGGACTTGTTCGGACG CGCCGGCCAGAAGCTCGAACCGCTGCTTTCGGGTGGTTCGGCGGCTGTGAACGAGTTGCGCGACGCGGCGCACAAGCTCG GCATCGTCCTGTCGGAAGACCAGATTCAACGGGCGGACGAGACGGCGGACAAGCTTTCCGCTCTCAAGCAAGTCCTTGAG GCGCGTATCGCGGGGGCAGTCTCGGACAACGCCAGTGCGATCCTCTCGCTTGCCAACGCGCTGGCCAGCGTCGTTGACTG GGCGGGCAAGGCCGCAGACGCCTACCGCCGGTTCAAGCTCGAACAGGGGCTGCGGGAATCGCAGGCGATGCAGACGGGCT GGTTCCGCTCCGATGCTGACCGCGCCAAGGGCCAGCGGGACGAGCAGCTGTATCGCTACGAAATTGCCAAGATGGACGGC AAGGTCGACACGACCGGCGGCTTCCGGGACTACCGCATCACCGGGATCGGAGGCGCCAGCGCAACCCCAGCACCCGGGGC TGTCGCATCTGCGGCGACAACTAAGAAGACGAAGGCAGCTACTGCCGGACCTTCAGGCCCATCTGCCGCCGAGATCATGG CCCGCATCGACAGCCAGTTGGCGTCTATGGCGCAGCAGGCCCTGTCCGCGATGGAGAGCGTCGCCAAGTCCGCCGATGAG CGTGCGGAACTTGAACTGCGCAGCGTCGAGCTGGCGCGCGTTCGGGCCTTGCGAGAGGTTGACACTGACACGGACCTTGA CCGGCTCGGCAAAGAGGGAGCGGCGAACCAGCGTGCGCGCCTCAAGACGCAGATCGAGGCGTTGGCCGATGCCGAACGCG ACCGCATCGAGCAGCGCCGGAAGGCGGAACTCGAACAAGACGCCCGCGACCTCGCCCAGGAACGCTACAGCACCGATCGC GACGGATTGCAGATCCAGTACGATCTCGCGGACAGTCAGACCGAGCGGAAACGCCTTGCGCTCGAAATGCTCGACCTCGA GCTGCGCTATCAGAAGGCGCTGCTCGAAGGCGTGATCGCTTCGGAAACTGCGACCGAGGCAGAGAAAAAGCGCGCTCAGG CGGCACTCGACGGTCTTAATGCAACAGCATCCGGCAAGCGCGAGGCGGCCTCGCGGTCCAACGAGACGCCGCTGGAAGCA TATCGTCGGAAGCTCGATCGCAGTCCGGACGCGATCAACGAGCAAGTCGAATCCTACGTCGTCGAAGAACTCGACAACGT CCGCGACGGCATCCGCGGTGCGCTGGAAAAGGCGATCGGCACCGACGATCCGCTGATTTCTGGCCTGCTGAACCTCTTGA TCGAGCAGGTCATTCTGCGTCCACTCGCCGAAGCTCTGGCGAGCGCGTCCGGCGGGGGCGGCGGATTTCTCGGTGCCGTC GCGTCCGGCATCGGCTCATTGTTCGGCCGAGCATCGGGCGGATACGTCGCGCCTGGCCAGATGGTGCGGGTCAACGAAGG CGCGTCGCCGGGTCGCGTGGAAGGCTTCATCCCGCAGGGCGGCGGACACATCGTGCCGCTGGGCCGCATGAATGCGCTGC GCCAGGCAGGCGGTCAGAAGGTTTTTCAGATCAGCATCGACGCTCGCAACAGCGTTACCCCCGACGGATTTGCGCGCGAA CTGTCGAGCCAAATCCTGCGCCAGGCCGCCGCGATGGACGGCCAGACTGCGCAAGCAGTCCTCAAGGCCGCGCCGGGCCG GATGAGCCAGTACCAGCGGGACAAAATCTGA
Upstream 100 bases:
>100_bases TTGGGGCCTGCATCGTGGCCGCAATCCACGGCAAGCCCTGACGGCGGTAACCTGCCCTCCCCTCGAAACATAGGTTCGCC CCGCCACCGGAGCGGACCCA
Downstream 100 bases:
>100_bases TGCCCTCGTACCGCGAAAGCTTCGTGTTCTACATCGATACCCCAGATCCGGCTGTATTCTGGTCCGGCGTCGGCCCGCTC CTTCTTGCGGCCGATGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 756; Mature: 755
Protein sequence:
>756_residues MPEIDPVILQLQADLKQYRSDLTGAQRLTETKLAAIEARGVAMGQNIRKGFDLAKGAAIGFLATVSVDALTQAAKRGLDY ASSLGEVAQQLGVTTDALQEYRYAASQAGLSQEEMDQALSQLTRRIGEAASGTKAQAEAFTKLGISVKDANGNVMDAGRA IPMIADALQKIESPAERAAILMDLFGRAGQKLEPLLSGGSAAVNELRDAAHKLGIVLSEDQIQRADETADKLSALKQVLE ARIAGAVSDNASAILSLANALASVVDWAGKAADAYRRFKLEQGLRESQAMQTGWFRSDADRAKGQRDEQLYRYEIAKMDG KVDTTGGFRDYRITGIGGASATPAPGAVASAATTKKTKAATAGPSGPSAAEIMARIDSQLASMAQQALSAMESVAKSADE RAELELRSVELARVRALREVDTDTDLDRLGKEGAANQRARLKTQIEALADAERDRIEQRRKAELEQDARDLAQERYSTDR DGLQIQYDLADSQTERKRLALEMLDLELRYQKALLEGVIASETATEAEKKRAQAALDGLNATASGKREAASRSNETPLEA YRRKLDRSPDAINEQVESYVVEELDNVRDGIRGALEKAIGTDDPLISGLLNLLIEQVILRPLAEALASASGGGGGFLGAV ASGIGSLFGRASGGYVAPGQMVRVNEGASPGRVEGFIPQGGGHIVPLGRMNALRQAGGQKVFQISIDARNSVTPDGFARE LSSQILRQAAAMDGQTAQAVLKAAPGRMSQYQRDKI
Sequences:
>Translated_756_residues MPEIDPVILQLQADLKQYRSDLTGAQRLTETKLAAIEARGVAMGQNIRKGFDLAKGAAIGFLATVSVDALTQAAKRGLDY ASSLGEVAQQLGVTTDALQEYRYAASQAGLSQEEMDQALSQLTRRIGEAASGTKAQAEAFTKLGISVKDANGNVMDAGRA IPMIADALQKIESPAERAAILMDLFGRAGQKLEPLLSGGSAAVNELRDAAHKLGIVLSEDQIQRADETADKLSALKQVLE ARIAGAVSDNASAILSLANALASVVDWAGKAADAYRRFKLEQGLRESQAMQTGWFRSDADRAKGQRDEQLYRYEIAKMDG KVDTTGGFRDYRITGIGGASATPAPGAVASAATTKKTKAATAGPSGPSAAEIMARIDSQLASMAQQALSAMESVAKSADE RAELELRSVELARVRALREVDTDTDLDRLGKEGAANQRARLKTQIEALADAERDRIEQRRKAELEQDARDLAQERYSTDR DGLQIQYDLADSQTERKRLALEMLDLELRYQKALLEGVIASETATEAEKKRAQAALDGLNATASGKREAASRSNETPLEA YRRKLDRSPDAINEQVESYVVEELDNVRDGIRGALEKAIGTDDPLISGLLNLLIEQVILRPLAEALASASGGGGGFLGAV ASGIGSLFGRASGGYVAPGQMVRVNEGASPGRVEGFIPQGGGHIVPLGRMNALRQAGGQKVFQISIDARNSVTPDGFARE LSSQILRQAAAMDGQTAQAVLKAAPGRMSQYQRDKI >Mature_755_residues PEIDPVILQLQADLKQYRSDLTGAQRLTETKLAAIEARGVAMGQNIRKGFDLAKGAAIGFLATVSVDALTQAAKRGLDYA SSLGEVAQQLGVTTDALQEYRYAASQAGLSQEEMDQALSQLTRRIGEAASGTKAQAEAFTKLGISVKDANGNVMDAGRAI PMIADALQKIESPAERAAILMDLFGRAGQKLEPLLSGGSAAVNELRDAAHKLGIVLSEDQIQRADETADKLSALKQVLEA RIAGAVSDNASAILSLANALASVVDWAGKAADAYRRFKLEQGLRESQAMQTGWFRSDADRAKGQRDEQLYRYEIAKMDGK VDTTGGFRDYRITGIGGASATPAPGAVASAATTKKTKAATAGPSGPSAAEIMARIDSQLASMAQQALSAMESVAKSADER AELELRSVELARVRALREVDTDTDLDRLGKEGAANQRARLKTQIEALADAERDRIEQRRKAELEQDARDLAQERYSTDRD GLQIQYDLADSQTERKRLALEMLDLELRYQKALLEGVIASETATEAEKKRAQAALDGLNATASGKREAASRSNETPLEAY RRKLDRSPDAINEQVESYVVEELDNVRDGIRGALEKAIGTDDPLISGLLNLLIEQVILRPLAEALASASGGGGGFLGAVA SGIGSLFGRASGGYVAPGQMVRVNEGASPGRVEGFIPQGGGHIVPLGRMNALRQAGGQKVFQISIDARNSVTPDGFAREL SSQILRQAAAMDGQTAQAVLKAAPGRMSQYQRDKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80521; Mature: 80389
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00485 A_DEAMINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIDPVILQLQADLKQYRSDLTGAQRLTETKLAAIEARGVAMGQNIRKGFDLAKGAAIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH FLATVSVDALTQAAKRGLDYASSLGEVAQQLGVTTDALQEYRYAASQAGLSQEEMDQALS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH QLTRRIGEAASGTKAQAEAFTKLGISVKDANGNVMDAGRAIPMIADALQKIESPAERAAI HHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCEECCCCHHHHHHHHHHHHHCHHHHHHH LMDLFGRAGQKLEPLLSGGSAAVNELRDAAHKLGIVLSEDQIQRADETADKLSALKQVLE HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHH ARIAGAVSDNASAILSLANALASVVDWAGKAADAYRRFKLEQGLRESQAMQTGWFRSDAD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RAKGQRDEQLYRYEIAKMDGKVDTTGGFRDYRITGIGGASATPAPGAVASAATTKKTKAA HHCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCC TAGPSGPSAAEIMARIDSQLASMAQQALSAMESVAKSADERAELELRSVELARVRALREV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC DTDTDLDRLGKEGAANQRARLKTQIEALADAERDRIEQRRKAELEQDARDLAQERYSTDR CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGLQIQYDLADSQTERKRLALEMLDLELRYQKALLEGVIASETATEAEKKRAQAALDGLN CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ATASGKREAASRSNETPLEAYRRKLDRSPDAINEQVESYVVEELDNVRDGIRGALEKAIG CCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDDPLISGLLNLLIEQVILRPLAEALASASGGGGGFLGAVASGIGSLFGRASGGYVAPGQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC MVRVNEGASPGRVEGFIPQGGGHIVPLGRMNALRQAGGQKVFQISIDARNSVTPDGFARE EEEECCCCCCCCCEEECCCCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHH LSSQILRQAAAMDGQTAQAVLKAAPGRMSQYQRDKI HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure PEIDPVILQLQADLKQYRSDLTGAQRLTETKLAAIEARGVAMGQNIRKGFDLAKGAAIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH FLATVSVDALTQAAKRGLDYASSLGEVAQQLGVTTDALQEYRYAASQAGLSQEEMDQALS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH QLTRRIGEAASGTKAQAEAFTKLGISVKDANGNVMDAGRAIPMIADALQKIESPAERAAI HHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCEECCCCHHHHHHHHHHHHHCHHHHHHH LMDLFGRAGQKLEPLLSGGSAAVNELRDAAHKLGIVLSEDQIQRADETADKLSALKQVLE HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHH ARIAGAVSDNASAILSLANALASVVDWAGKAADAYRRFKLEQGLRESQAMQTGWFRSDAD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH RAKGQRDEQLYRYEIAKMDGKVDTTGGFRDYRITGIGGASATPAPGAVASAATTKKTKAA HHCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCC TAGPSGPSAAEIMARIDSQLASMAQQALSAMESVAKSADERAELELRSVELARVRALREV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC DTDTDLDRLGKEGAANQRARLKTQIEALADAERDRIEQRRKAELEQDARDLAQERYSTDR CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DGLQIQYDLADSQTERKRLALEMLDLELRYQKALLEGVIASETATEAEKKRAQAALDGLN CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ATASGKREAASRSNETPLEAYRRKLDRSPDAINEQVESYVVEELDNVRDGIRGALEKAIG CCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TDDPLISGLLNLLIEQVILRPLAEALASASGGGGGFLGAVASGIGSLFGRASGGYVAPGQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC MVRVNEGASPGRVEGFIPQGGGHIVPLGRMNALRQAGGQKVFQISIDARNSVTPDGFARE EEEECCCCCCCCCEEECCCCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHH LSSQILRQAAAMDGQTAQAVLKAAPGRMSQYQRDKI HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA