| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200734
Identifier: 87200734
GI number: 87200734
Start: 2952920
End: 2953414
Strand: Reverse
Name: 87200734
Synonym: Saro_2721
Alternate gene names: NA
Gene position: 2953414-2952920 (Counterclockwise)
Preceding gene: 87200744
Following gene: 87200730
Centisome position: 82.92
GC content: 52.53
Gene sequence:
>495_bases ATGCAGCACTTGATTGATGATTTGCGAGCGTGCGCATCCGCAGGCATTTGGCATGCAGCACTAGCACTTGCCTTATCAGT TCCCGACATTTGTGGTGGTTACGATGCACCGAATGCAGGCAGCCGCGCTCGGTTTGTGAATTGGTGGAATCGCCACATGG CACAAAAATTGGTGCCGACTGGGGCGCGTCCTTTAGATGCTCGAGATATATACGCCCTGCGCTGTGCGATGCTCCATGAA GGCAAGGGCAATATTGAGCGGCAACGGGCCCGAGTTGCTGTCGCAGAATTCGCATTCATCAGGCCGCCTGACGGTTTGGT AATGCACTACAACACTTTCAACAATCAACTGGTCCTTCAGGTCGACCTTTTTTGCGAACAAATCTGCCGAGGTGCCGAGG AGTGGTTAGCCATTCCTGGTAATGCCCGGAAGGTGGAAGCAGAGCCGATGATGCAAGTATTCGATATGAGGAAAGGTGGC TTCTTTCGCTTCTAA
Upstream 100 bases:
>100_bases GGTGCGGCGCGGTGCATCAAGGGTAAGGGCGTCGACGAATTGCATCGACGGCGGGGATATGCGGTAAGGCTAGGCGTCGT TACCGCCGTCAGAGGAAGAT
Downstream 100 bases:
>100_bases AACTCCCCATCCAAGCTTAGCACAGCCCGCGACGTACACCCACAAAACGGCAACTGCCCTGGCCTGTCCTGTGGAGGCGG CGCACCGTCAGCAGGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MQHLIDDLRACASAGIWHAALALALSVPDICGGYDAPNAGSRARFVNWWNRHMAQKLVPTGARPLDARDIYALRCAMLHE GKGNIERQRARVAVAEFAFIRPPDGLVMHYNTFNNQLVLQVDLFCEQICRGAEEWLAIPGNARKVEAEPMMQVFDMRKGG FFRF
Sequences:
>Translated_164_residues MQHLIDDLRACASAGIWHAALALALSVPDICGGYDAPNAGSRARFVNWWNRHMAQKLVPTGARPLDARDIYALRCAMLHE GKGNIERQRARVAVAEFAFIRPPDGLVMHYNTFNNQLVLQVDLFCEQICRGAEEWLAIPGNARKVEAEPMMQVFDMRKGG FFRF >Mature_164_residues MQHLIDDLRACASAGIWHAALALALSVPDICGGYDAPNAGSRARFVNWWNRHMAQKLVPTGARPLDARDIYALRCAMLHE GKGNIERQRARVAVAEFAFIRPPDGLVMHYNTFNNQLVLQVDLFCEQICRGAEEWLAIPGNARKVEAEPMMQVFDMRKGG FFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18472; Mature: 18472
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLIDDLRACASAGIWHAALALALSVPDICGGYDAPNAGSRARFVNWWNRHMAQKLVPT CHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GARPLDARDIYALRCAMLHEGKGNIERQRARVAVAEFAFIRPPDGLVMHYNTFNNQLVLQ CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCEEEEEECCCCEEEEE VDLFCEQICRGAEEWLAIPGNARKVEAEPMMQVFDMRKGGFFRF HHHHHHHHHCCHHHEEECCCCCCEECHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQHLIDDLRACASAGIWHAALALALSVPDICGGYDAPNAGSRARFVNWWNRHMAQKLVPT CHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GARPLDARDIYALRCAMLHEGKGNIERQRARVAVAEFAFIRPPDGLVMHYNTFNNQLVLQ CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCEEEEEECCCCEEEEE VDLFCEQICRGAEEWLAIPGNARKVEAEPMMQVFDMRKGGFFRF HHHHHHHHHCCHHHEEECCCCCCEECHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA