Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200731

Identifier: 87200731

GI number: 87200731

Start: 2949732

End: 2951636

Strand: Direct

Name: 87200731

Synonym: Saro_2718

Alternate gene names: NA

Gene position: 2949732-2951636 (Clockwise)

Preceding gene: 87200729

Following gene: 87200732

Centisome position: 82.82

GC content: 65.25

Gene sequence:

>1905_bases
ATGGGCACCGTGACCAACATCCTCGACAGCCTCCGCAATGCGCTCACAGGCCAAGGCACGTCGCGCGATCCCCGCACCGC
ATCGGCGTACTGCGCGACCCGCGCCCTCACCCAGCACGAAATCCATGCCGCCTACTCCGGCTCTGGCCTGCTCAAGAAGA
TCATCCAGATCCCACCGCTCGACATGGTGCGGGAATGGCGCGACTGGTCCGGCCTCGACGATGACCAGGCCGCGCTGATC
TGGGACGAGGAAAAGCGGCTCGGGCTGCGCGAGAAGGCGAAGCTTGCCGAGACCCTGCGCGGACTTGGCGGCGGCGCGTT
CATCCTCGGCCTGCCTGGTCAGCCTGCCACGCCCGCACCGAAAGCGGTGGCCAAAGGTGGTCTCGCCTACATCAACGTCG
TCTCGCGCTGGCACCTGACGTTCGATGCGCTGCAGGACGATGCCCGCCTTCCCGGCTACGGCGAGCCGCAGATGTGGCGC
ATGCAGACCGCAACCGGTCAGCAGCTCATTCATCCCTCGCGCGTCGTGACGTTCCGTGCCGACACCAGCGGTTCCCTGAT
TGCGAGCATGGCCAGCCAGGACGACGCCTACTGGGGCGAAAGCAGGCTGGAGCAGGTCCTTGAAGCAGTGAAGGACAGCG
ACACCGCGCGCGCGTCGTTCGCAGCGCTGCTTCACAAAGCCCGCCTAACCCGCATCGGTATTCCGAACCTGTCGGACATC
GTGTCGACCAGCGACGGAGAGAGCCGCATTGGCGCCCGCCTCGGCATGATCGCGCTGGCGGAAAGCATGTACAACGCGGC
GGTCTACGACAGCGGAAATGGCGCCGACGGCCCGGCGGAGAAGATCGACGACGTTGCCTACAACTTCGCCGGGGCCAAGG
ACGTTCTCAACGCCTTCGCCGAGTTCGCCGCCGCGATTTCCGACATCCCGGCGACGCGTCTGCTCGGCCGCGCCCCAGAA
GGCATGAACTCGTCCGGCGACAGTCAGCAAAAGGACTGGTCGAAAAAGGTCCGCGCGATGCAGACCCTCGAACTCGGGCC
CTGTCTCGACCGCGTCGACGCTTACCTCGTGCCCTCCGCGCTGGGGCGCGCCGAACCGAACGCCAGCTACGCATTTGCCC
CGCTCGATGTCGAGACCGACAAGGAGCGCGCCGATCGCTTCGCCAAGCAGATGGAAGCGGCCGAGAAGCTGGCCGGCCTC
AACGCAATGCCGGAGCAGGCATTCAACCGCGGCATCCAATCGCTGATGATCTCTGAGGGCTACCTCCCCGAACTTGAGGC
GGCGCTGTCCGATATCCCCGACGACGAGCGCTATGGCATCGTTGCCGATCCCTCGCCCGAGGACATGAATCCCGATGGGA
CGAAAGGAGGTGATCCGGCTATCTCGGCTCCGGGCGGGACCTCGACCACCCCGCCTGTGGCTGCCAACGACGCCAGCCCG
CGACCGCTGTATGTCCATCGCAAGTTGCTGAACGGCGGTGAGCTGATCGACTGGGCGAAAGCACAAGGCTTCGACGTGAC
GGTCCCTGCCGACCAGCTCCATGTCACCGTGCTATATTCTCGTGCCGCTGTCGATCCGATGGCGATGGGCGAAGGATGGT
CGAGCGATCCCGATGGCGGTCTGGTGATCAAGGCTGGCGGTCCGCGCGCGCTCGAACGGTTCGGAGAAGGCGCCGTCGTC
CTCCAGTTCGCGTCGTGGTCGCTGCAGTCGCGCCACGACGAGATGGTGCGCGCCGGCGCAAGTCACGACTATCCGGAATA
CCTGCCGCACGTGACGCTGACCTATCAGGCACCGGAAGGCATCGACCTCGAAGCGATCAAGCCGTTTTCCGGAGAGTTGC
GCTTCGGGCCTGAGGTGTTCGAGCCGCTGGATCTGGACTGGAAGTCGAAGATTACGGAGGAGTGA

Upstream 100 bases:

>100_bases
AGAAGTAGCTTGCTGTGTTTTTATCGCAAAGGAGGTGGTCTGAAACACTAGGACCTGACGGCGGTAACCTCACCCCACCC
GCAACCCTACGCCCACCTCC

Downstream 100 bases:

>100_bases
GGTGCTAACCTTCGTGCCCATCTCGATCCGATCAGCAAAAGCTTTTGTTCGCGAGCACCATCGCCACAATCCATCGGTTG
CTGGAGCAAGAACGGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 633

Protein sequence:

>634_residues
MGTVTNILDSLRNALTGQGTSRDPRTASAYCATRALTQHEIHAAYSGSGLLKKIIQIPPLDMVREWRDWSGLDDDQAALI
WDEEKRLGLREKAKLAETLRGLGGGAFILGLPGQPATPAPKAVAKGGLAYINVVSRWHLTFDALQDDARLPGYGEPQMWR
MQTATGQQLIHPSRVVTFRADTSGSLIASMASQDDAYWGESRLEQVLEAVKDSDTARASFAALLHKARLTRIGIPNLSDI
VSTSDGESRIGARLGMIALAESMYNAAVYDSGNGADGPAEKIDDVAYNFAGAKDVLNAFAEFAAAISDIPATRLLGRAPE
GMNSSGDSQQKDWSKKVRAMQTLELGPCLDRVDAYLVPSALGRAEPNASYAFAPLDVETDKERADRFAKQMEAAEKLAGL
NAMPEQAFNRGIQSLMISEGYLPELEAALSDIPDDERYGIVADPSPEDMNPDGTKGGDPAISAPGGTSTTPPVAANDASP
RPLYVHRKLLNGGELIDWAKAQGFDVTVPADQLHVTVLYSRAAVDPMAMGEGWSSDPDGGLVIKAGGPRALERFGEGAVV
LQFASWSLQSRHDEMVRAGASHDYPEYLPHVTLTYQAPEGIDLEAIKPFSGELRFGPEVFEPLDLDWKSKITEE

Sequences:

>Translated_634_residues
MGTVTNILDSLRNALTGQGTSRDPRTASAYCATRALTQHEIHAAYSGSGLLKKIIQIPPLDMVREWRDWSGLDDDQAALI
WDEEKRLGLREKAKLAETLRGLGGGAFILGLPGQPATPAPKAVAKGGLAYINVVSRWHLTFDALQDDARLPGYGEPQMWR
MQTATGQQLIHPSRVVTFRADTSGSLIASMASQDDAYWGESRLEQVLEAVKDSDTARASFAALLHKARLTRIGIPNLSDI
VSTSDGESRIGARLGMIALAESMYNAAVYDSGNGADGPAEKIDDVAYNFAGAKDVLNAFAEFAAAISDIPATRLLGRAPE
GMNSSGDSQQKDWSKKVRAMQTLELGPCLDRVDAYLVPSALGRAEPNASYAFAPLDVETDKERADRFAKQMEAAEKLAGL
NAMPEQAFNRGIQSLMISEGYLPELEAALSDIPDDERYGIVADPSPEDMNPDGTKGGDPAISAPGGTSTTPPVAANDASP
RPLYVHRKLLNGGELIDWAKAQGFDVTVPADQLHVTVLYSRAAVDPMAMGEGWSSDPDGGLVIKAGGPRALERFGEGAVV
LQFASWSLQSRHDEMVRAGASHDYPEYLPHVTLTYQAPEGIDLEAIKPFSGELRFGPEVFEPLDLDWKSKITEE
>Mature_633_residues
GTVTNILDSLRNALTGQGTSRDPRTASAYCATRALTQHEIHAAYSGSGLLKKIIQIPPLDMVREWRDWSGLDDDQAALIW
DEEKRLGLREKAKLAETLRGLGGGAFILGLPGQPATPAPKAVAKGGLAYINVVSRWHLTFDALQDDARLPGYGEPQMWRM
QTATGQQLIHPSRVVTFRADTSGSLIASMASQDDAYWGESRLEQVLEAVKDSDTARASFAALLHKARLTRIGIPNLSDIV
STSDGESRIGARLGMIALAESMYNAAVYDSGNGADGPAEKIDDVAYNFAGAKDVLNAFAEFAAAISDIPATRLLGRAPEG
MNSSGDSQQKDWSKKVRAMQTLELGPCLDRVDAYLVPSALGRAEPNASYAFAPLDVETDKERADRFAKQMEAAEKLAGLN
AMPEQAFNRGIQSLMISEGYLPELEAALSDIPDDERYGIVADPSPEDMNPDGTKGGDPAISAPGGTSTTPPVAANDASPR
PLYVHRKLLNGGELIDWAKAQGFDVTVPADQLHVTVLYSRAAVDPMAMGEGWSSDPDGGLVIKAGGPRALERFGEGAVVL
QFASWSLQSRHDEMVRAGASHDYPEYLPHVTLTYQAPEGIDLEAIKPFSGELRFGPEVFEPLDLDWKSKITEE

Specific function: Unknown

COG id: COG3567

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006445 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68249; Mature: 68118

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVTNILDSLRNALTGQGTSRDPRTASAYCATRALTQHEIHAAYSGSGLLKKIIQIPPL
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
DMVREWRDWSGLDDDQAALIWDEEKRLGLREKAKLAETLRGLGGGAFILGLPGQPATPAP
HHHHHHHCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
KAVAKGGLAYINVVSRWHLTFDALQDDARLPGYGEPQMWRMQTATGQQLIHPSRVVTFRA
HHHHHCCHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHCCCCEEEEEEC
DTSGSLIASMASQDDAYWGESRLEQVLEAVKDSDTARASFAALLHKARLTRIGIPNLSDI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
VSTSDGESRIGARLGMIALAESMYNAAVYDSGNGADGPAEKIDDVAYNFAGAKDVLNAFA
HCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
EFAAAISDIPATRLLGRAPEGMNSSGDSQQKDWSKKVRAMQTLELGPCLDRVDAYLVPSA
HHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LGRAEPNASYAFAPLDVETDKERADRFAKQMEAAEKLAGLNAMPEQAFNRGIQSLMISEG
HCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
YLPELEAALSDIPDDERYGIVADPSPEDMNPDGTKGGDPAISAPGGTSTTPPVAANDASP
CCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPLYVHRKLLNGGELIDWAKAQGFDVTVPADQLHVTVLYSRAAVDPMAMGEGWSSDPDGG
CCEEHHHHHCCCCCEEEHHCCCCCEEECCCCCEEEEEEEHHHCCCCHHCCCCCCCCCCCC
LVIKAGGPRALERFGEGAVVLQFASWSLQSRHDEMVRAGASHDYPEYLPHVTLTYQAPEG
EEEECCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCC
IDLEAIKPFSGELRFGPEVFEPLDLDWKSKITEE
CCHHEECCCCCCCCCCHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure 
GTVTNILDSLRNALTGQGTSRDPRTASAYCATRALTQHEIHAAYSGSGLLKKIIQIPPL
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
DMVREWRDWSGLDDDQAALIWDEEKRLGLREKAKLAETLRGLGGGAFILGLPGQPATPAP
HHHHHHHCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
KAVAKGGLAYINVVSRWHLTFDALQDDARLPGYGEPQMWRMQTATGQQLIHPSRVVTFRA
HHHHHCCHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHCCCCEEEEEEC
DTSGSLIASMASQDDAYWGESRLEQVLEAVKDSDTARASFAALLHKARLTRIGIPNLSDI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
VSTSDGESRIGARLGMIALAESMYNAAVYDSGNGADGPAEKIDDVAYNFAGAKDVLNAFA
HCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
EFAAAISDIPATRLLGRAPEGMNSSGDSQQKDWSKKVRAMQTLELGPCLDRVDAYLVPSA
HHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LGRAEPNASYAFAPLDVETDKERADRFAKQMEAAEKLAGLNAMPEQAFNRGIQSLMISEG
HCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
YLPELEAALSDIPDDERYGIVADPSPEDMNPDGTKGGDPAISAPGGTSTTPPVAANDASP
CCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RPLYVHRKLLNGGELIDWAKAQGFDVTVPADQLHVTVLYSRAAVDPMAMGEGWSSDPDGG
CCEEHHHHHCCCCCEEEHHCCCCCEEECCCCCEEEEEEEHHHCCCCHHCCCCCCCCCCCC
LVIKAGGPRALERFGEGAVVLQFASWSLQSRHDEMVRAGASHDYPEYLPHVTLTYQAPEG
EEEECCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCEEEEEECCCC
IDLEAIKPFSGELRFGPEVFEPLDLDWKSKITEE
CCHHEECCCCCCCCCCHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]