Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200725

Identifier: 87200725

GI number: 87200725

Start: 2945335

End: 2946594

Strand: Direct

Name: 87200725

Synonym: Saro_2712

Alternate gene names: NA

Gene position: 2945335-2946594 (Clockwise)

Preceding gene: 87200724

Following gene: 87200726

Centisome position: 82.7

GC content: 64.37

Gene sequence:

>1260_bases
GTGAGCGTGTCGGACGCAGGCAACTTTGACGCAAACGACGTCGCCGTCACCTTCGGCATCGACAAGGTGCGCGAGGCGTT
CGAGCAGCGCCGTAGCACCCTGCCACCGTTCGCGCCGTATGACGAGGAGCCGGAATCCGAGCGCCCCAAGCTCAAGGCGA
CCCCGTTCTCGTGGCGCGACCCGGCGACGATCCCGCCGCGCAAGTGGCTCTATGGGCGGCATCTGATCCGCAAGTTTCTT
TCGCTCGACATCGCTCCTGGCGGTCTCGGCAAGTCGAGCGTGAAGATCGTCGAGGCCCTTGCGATGACAACGGGCCGCAA
CCTTCTCGGCAAGGACTGCCACGAGGGCCCGCTCAACGTCTGGCTCTACAACCTCGAGGATCCGGCGGAGGAAACCGAAC
GCCGCATCCACGCCGCAGCGCAGTGGTTTGAGATCGGCCCCGACGATGTGGGCGAGCGCCTGTTCGTCGATTCCGGCCGT
GAGCAGCCGATCTGCATCGCGGAGGAAACCGACGGCGGTGCGCGCATCGTTCGGCCGGTCGTCGAAGCGGTGATCGAACA
GTTGAAAGACCGCCGGATCGACGTCCTCAGCATCGACCCGTTCGTCTCCAGCCACGCGATCAGCGAAAACGACAACCGCG
CGATCGACATGGTGGCGAAAGAGTGGTCGCGCATCGCCGACATCTGCGATTGCGCCATCAACCTGGTTCACCACGTCCGC
AAGACGAACGGCGCGGAAGTAACCGCGGAAAGCAGCCGCGGCGCCGTCTCGCTGATCGGTGCGGCACGTAGCGTCGTGGT
CTACAACCGCATGACCAAGGAGGAAGGAGAGCGCGCCGGCATCGAACCGCGCCAGCTCGGTTTCTACTTCCGCACCCAGA
ACGACAAGGCGAACCTTGCACCGCCCGAAGCGGCGGACTGGTTCCGCATGAACAACGTCGACCTGCCCAACGGCGACAGC
GTCGGCGTGGCATGTCCGTGGCAATGGCCCGACCCCTTTGATGGCGTCAGCACCTGGCACCTCAAGGAGGTCCAGAAGCG
GGTGTCGCAGGGCCGCTATCGCGCCGACGTCCGGAGCGCCCAGTGGGTCGGCCACGTGATCGCCAATGTCCTCGATATCG
ACCTCGAGAAGAAGGCTGGAAGGGTCAAGGACATCCTCAAGCAGTGGCTCAAGAACGACATGCTGCGCGAGGTCGAGGGA
ACGGACGAGAAGCGCAACGTCCGCAAGTTCGTGGAGGTCGGAACATGGCACACGGACTGA

Upstream 100 bases:

>100_bases
GCATCTACAAGAATCCCGGGATCGAGACCGCCGAAGCCGTTGCTGCCGAGATCGGAGCGCACGTTGCCTATCCGCTGGGT
CGGCCGCAGAGGGGGGCAGC

Downstream 100 bases:

>100_bases
ACTGGGGCACAACCGTGGCAACTGTGGCAGGGGAAGCAGGCCGTCTGTCTGACGCGCCCCACTGCGACAATCGAAACGGC
GGAAATCTGCGGTTTTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSVSDAGNFDANDVAVTFGIDKVREAFEQRRSTLPPFAPYDEEPESERPKLKATPFSWRDPATIPPRKWLYGRHLIRKFL
SLDIAPGGLGKSSVKIVEALAMTTGRNLLGKDCHEGPLNVWLYNLEDPAEETERRIHAAAQWFEIGPDDVGERLFVDSGR
EQPICIAEETDGGARIVRPVVEAVIEQLKDRRIDVLSIDPFVSSHAISENDNRAIDMVAKEWSRIADICDCAINLVHHVR
KTNGAEVTAESSRGAVSLIGAARSVVVYNRMTKEEGERAGIEPRQLGFYFRTQNDKANLAPPEAADWFRMNNVDLPNGDS
VGVACPWQWPDPFDGVSTWHLKEVQKRVSQGRYRADVRSAQWVGHVIANVLDIDLEKKAGRVKDILKQWLKNDMLREVEG
TDEKRNVRKFVEVGTWHTD

Sequences:

>Translated_419_residues
MSVSDAGNFDANDVAVTFGIDKVREAFEQRRSTLPPFAPYDEEPESERPKLKATPFSWRDPATIPPRKWLYGRHLIRKFL
SLDIAPGGLGKSSVKIVEALAMTTGRNLLGKDCHEGPLNVWLYNLEDPAEETERRIHAAAQWFEIGPDDVGERLFVDSGR
EQPICIAEETDGGARIVRPVVEAVIEQLKDRRIDVLSIDPFVSSHAISENDNRAIDMVAKEWSRIADICDCAINLVHHVR
KTNGAEVTAESSRGAVSLIGAARSVVVYNRMTKEEGERAGIEPRQLGFYFRTQNDKANLAPPEAADWFRMNNVDLPNGDS
VGVACPWQWPDPFDGVSTWHLKEVQKRVSQGRYRADVRSAQWVGHVIANVLDIDLEKKAGRVKDILKQWLKNDMLREVEG
TDEKRNVRKFVEVGTWHTD
>Mature_418_residues
SVSDAGNFDANDVAVTFGIDKVREAFEQRRSTLPPFAPYDEEPESERPKLKATPFSWRDPATIPPRKWLYGRHLIRKFLS
LDIAPGGLGKSSVKIVEALAMTTGRNLLGKDCHEGPLNVWLYNLEDPAEETERRIHAAAQWFEIGPDDVGERLFVDSGRE
QPICIAEETDGGARIVRPVVEAVIEQLKDRRIDVLSIDPFVSSHAISENDNRAIDMVAKEWSRIADICDCAINLVHHVRK
TNGAEVTAESSRGAVSLIGAARSVVVYNRMTKEEGERAGIEPRQLGFYFRTQNDKANLAPPEAADWFRMNNVDLPNGDSV
GVACPWQWPDPFDGVSTWHLKEVQKRVSQGRYRADVRSAQWVGHVIANVLDIDLEKKAGRVKDILKQWLKNDMLREVEGT
DEKRNVRKFVEVGTWHTD

Specific function: Unknown

COG id: COG3598

COG function: function code L; RecA-family ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47187; Mature: 47055

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSDAGNFDANDVAVTFGIDKVREAFEQRRSTLPPFAPYDEEPESERPKLKATPFSWRD
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCC
PATIPPRKWLYGRHLIRKFLSLDIAPGGLGKSSVKIVEALAMTTGRNLLGKDCHEGPLNV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCEE
WLYNLEDPAEETERRIHAAAQWFEIGPDDVGERLFVDSGREQPICIAEETDGGARIVRPV
EEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCCCCEEEEECCCCCHHHHHHH
VEAVIEQLKDRRIDVLSIDPFVSSHAISENDNRAIDMVAKEWSRIADICDCAINLVHHVR
HHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTNGAEVTAESSRGAVSLIGAARSVVVYNRMTKEEGERAGIEPRQLGFYFRTQNDKANLA
HCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCC
PPEAADWFRMNNVDLPNGDSVGVACPWQWPDPFDGVSTWHLKEVQKRVSQGRYRADVRSA
CCCCHHHEECCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
QWVGHVIANVLDIDLEKKAGRVKDILKQWLKNDMLREVEGTDEKRNVRKFVEVGTWHTD
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVSDAGNFDANDVAVTFGIDKVREAFEQRRSTLPPFAPYDEEPESERPKLKATPFSWRD
CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCC
PATIPPRKWLYGRHLIRKFLSLDIAPGGLGKSSVKIVEALAMTTGRNLLGKDCHEGPLNV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCEE
WLYNLEDPAEETERRIHAAAQWFEIGPDDVGERLFVDSGREQPICIAEETDGGARIVRPV
EEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCCCCEEEEECCCCCHHHHHHH
VEAVIEQLKDRRIDVLSIDPFVSSHAISENDNRAIDMVAKEWSRIADICDCAINLVHHVR
HHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTNGAEVTAESSRGAVSLIGAARSVVVYNRMTKEEGERAGIEPRQLGFYFRTQNDKANLA
HCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCC
PPEAADWFRMNNVDLPNGDSVGVACPWQWPDPFDGVSTWHLKEVQKRVSQGRYRADVRSA
CCCCHHHEECCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
QWVGHVIANVLDIDLEKKAGRVKDILKQWLKNDMLREVEGTDEKRNVRKFVEVGTWHTD
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA