| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200715
Identifier: 87200715
GI number: 87200715
Start: 2938885
End: 2939229
Strand: Reverse
Name: 87200715
Synonym: Saro_2702
Alternate gene names: NA
Gene position: 2939229-2938885 (Counterclockwise)
Preceding gene: 87200716
Following gene: 87200713
Centisome position: 82.53
GC content: 63.48
Gene sequence:
>345_bases ATGGCAACTGCCACCCACATCAAGCTACCCTGGAACTTCCGCAGCGAAGTCCAGCATTGCACCACCTGCGAAGGCTCTGG CCGCGTTGCCAGCCAAGCGCGTCCCTCGGTGTGGAACCCCTATCCCGAAACCGAATGCAACGACTGCGGTGGCCGTGAAG GCTGCGCGCCGTGCGAGGTCTGCGGGTCGGAAGTGCACGTGCCGGGATATGACTGCTTCGTCTGTCAGTGCGTCGACGAA CTTCCCCGCGATGCCCTCGCAGATAGCGAGGCGCTGCTTCAGGCGATCAAGACGGCGATTGAAACTCGCCTGCTGAGCCT GACGGATCGGAGGCTCGCGGCGTGA
Upstream 100 bases:
>100_bases AAGTTTAGAACTTCCGATAGTCGCAACTTTCTTCTTGCGATGCTTCCGATAATCGCATATTGAGGTTCCAACAGCCCGCC AGCTGATTGGAGCCCACCCC
Downstream 100 bases:
>100_bases TGGCGACCGGACGCTACCTCGACCGCGCTACGCGCGAGCAACGCCTTGCCGAGGCCCGCGCATGGCGCATCCGCATGAAG CCCTATTTCGACGCAATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MATATHIKLPWNFRSEVQHCTTCEGSGRVASQARPSVWNPYPETECNDCGGREGCAPCEVCGSEVHVPGYDCFVCQCVDE LPRDALADSEALLQAIKTAIETRLLSLTDRRLAA
Sequences:
>Translated_114_residues MATATHIKLPWNFRSEVQHCTTCEGSGRVASQARPSVWNPYPETECNDCGGREGCAPCEVCGSEVHVPGYDCFVCQCVDE LPRDALADSEALLQAIKTAIETRLLSLTDRRLAA >Mature_113_residues ATATHIKLPWNFRSEVQHCTTCEGSGRVASQARPSVWNPYPETECNDCGGREGCAPCEVCGSEVHVPGYDCFVCQCVDEL PRDALADSEALLQAIKTAIETRLLSLTDRRLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12429; Mature: 12298
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 8.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATATHIKLPWNFRSEVQHCTTCEGSGRVASQARPSVWNPYPETECNDCGGREGCAPCEV CCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH CGSEVHVPGYDCFVCQCVDELPRDALADSEALLQAIKTAIETRLLSLTDRRLAA CCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATATHIKLPWNFRSEVQHCTTCEGSGRVASQARPSVWNPYPETECNDCGGREGCAPCEV CCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH CGSEVHVPGYDCFVCQCVDELPRDALADSEALLQAIKTAIETRLLSLTDRRLAA CCCCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA