| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200708
Identifier: 87200708
GI number: 87200708
Start: 2935442
End: 2935678
Strand: Reverse
Name: 87200708
Synonym: Saro_2695
Alternate gene names: NA
Gene position: 2935678-2935442 (Counterclockwise)
Preceding gene: 87200709
Following gene: 87200707
Centisome position: 82.43
GC content: 69.62
Gene sequence:
>237_bases GTGCCTGACATCCTCCCCATCATCCGCGCCCGCACCAACCCGGCGCTGCACCACGCAGTCACGCCCGACGCGCTGCTGTC CGACCTCGGCTTCCGGCAGGAGATCGACCTCGTTGGCCTCCAGTGCGCGGTCGAGGAAGCCGTCGGCCGCGAGTTTCCCG ATCAGGCCCATGCGCATTGGCGCACCGTGGCCGATGTCCGTGAGGCGGCGGAGTGGTTTGAGGGGGTGGTGGCGTGA
Upstream 100 bases:
>100_bases TCATCCTCCTTACCATCATCGCGCTGATCTGGATTGGCTGGCCGCTGCACAGCATCGCCTCCGACCTCCGGTTCATGCGC CGCAAGATCAAGGACTGATC
Downstream 100 bases:
>100_bases GTCGCATCCTGATCGCCTGCGAATACAGCGGCACCGTCCGGCGCGCATTCACCGCCCGCGGTTTCGACGCATGGTCCTGC GACCTGCTGCCGGCCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPDILPIIRARTNPALHHAVTPDALLSDLGFRQEIDLVGLQCAVEEAVGREFPDQAHAHWRTVADVREAAEWFEGVVA
Sequences:
>Translated_78_residues MPDILPIIRARTNPALHHAVTPDALLSDLGFRQEIDLVGLQCAVEEAVGREFPDQAHAHWRTVADVREAAEWFEGVVA >Mature_77_residues PDILPIIRARTNPALHHAVTPDALLSDLGFRQEIDLVGLQCAVEEAVGREFPDQAHAHWRTVADVREAAEWFEGVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8640; Mature: 8509
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDILPIIRARTNPALHHAVTPDALLSDLGFRQEIDLVGLQCAVEEAVGREFPDQAHAHW CCCCHHHHHCCCCCHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH RTVADVREAAEWFEGVVA HHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDILPIIRARTNPALHHAVTPDALLSDLGFRQEIDLVGLQCAVEEAVGREFPDQAHAHW CCCHHHHHCCCCCHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH RTVADVREAAEWFEGVVA HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA