| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200698
Identifier: 87200698
GI number: 87200698
Start: 2924512
End: 2925492
Strand: Direct
Name: 87200698
Synonym: Saro_2685
Alternate gene names: NA
Gene position: 2924512-2925492 (Clockwise)
Preceding gene: 87200697
Following gene: 87200700
Centisome position: 82.11
GC content: 67.48
Gene sequence:
>981_bases ATGGGGCAGGTACTGGCAAGTTTCGATTTTCCCGCAGACGATGTTGCACTGCTGGCCCCCTGCTCGCCCTTGGCCGTGGC GATTTTCGCGGACCGTCCCTACCTGCGCACCGAAATGGCGGAAGATGCGGCCGCCGCCGGCCTCCGGGTCACCCGCACGG CGGGCCTGCGTGCCCTGCTGGAAGAACCGGAACAGCCGCTGGGCGATCTTGTGCTCGTCGATTGCCCGGTGATCGAATCT GCCGACATTGCCGCGCTTGCCCGGCTCGACATGCGGGCTGCGCGTACCGGGGCCCGCCTCGTCGTCTCGACCAGCATGGG CTCGCTCGACGACGTGTTCGGTTCTCTCGACCAGTGCGATCCCCAGATCCTGGTCAGCCCGAGCCGCGCGGATCGCGTGA TCGCCCTTGGCCGGCTGCTGACTTCTGACGGCGCGCGGGTTCGCGAACTGTCGGATCATGACCGCATTTCCCTGCTGCGC CTGACCGAACAGGTTGCGCAGATCGCCCAGAGGCTGGAAACGCTGTCTTCGCCCGGCAACGGCAACCAGACGGTCGAAGC GCCGGCCTTCGGTTTCGGTGCCGAAAGCCTGCGGGACGAGGCCAGCCGCCGCCTCGTCCGACCGGCCCGCGCCTCGCTTC CCGATCCCCGTCTGGTCCGCAAGATCATCCGCCAGCGCCAGATGCGCGCGCGCTTCTTCGAAGGGGATCTCTTCGCCGAT CCCGCGTGGGACATGCTGCTCGATCTCACCGCCGCCCGCGCGGAACACAAGCGCGTGTCGGTCACTTCGCTCTGCATCGC CTCGGGCGTTCCGCCGACGACGGCGCTGCGCTGGATCGGCCAGATGACGGACTGCGGCCTCTTCGCCCGTTGCGAAGACG ACAGCGACCGCCGCCGCGCCTTCATTTCCCTGTCCGACAAGGCCGCCGAAGCAATGTCCCACTACTTCGCCGAAGTGGAA ACGGCAGGCCTGCTGATCTGA
Upstream 100 bases:
>100_bases GATCGTGCCTTGATCCAAAATCGAGGTAATCGATCTTGACCTGACCCCTGTTTGTTCCACACCTGTTCGCACTAGGTGGG ATTACTCAGGGGTAAGCGCG
Downstream 100 bases:
>100_bases CCGAAGCGGGCCGACACGACCCGCCTCGATCACCTCGCCTGCCGCGTCCGCCCCGCCGTCACGCCCGGCAGGCGATCGGA TTGGGCGTCGGTGCGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Repair Protein RadC; Two-Component Response Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein; Regulatory Protein MarR; Response Regulator Receiver Protein
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MGQVLASFDFPADDVALLAPCSPLAVAIFADRPYLRTEMAEDAAAAGLRVTRTAGLRALLEEPEQPLGDLVLVDCPVIES ADIAALARLDMRAARTGARLVVSTSMGSLDDVFGSLDQCDPQILVSPSRADRVIALGRLLTSDGARVRELSDHDRISLLR LTEQVAQIAQRLETLSSPGNGNQTVEAPAFGFGAESLRDEASRRLVRPARASLPDPRLVRKIIRQRQMRARFFEGDLFAD PAWDMLLDLTAARAEHKRVSVTSLCIASGVPPTTALRWIGQMTDCGLFARCEDDSDRRRAFISLSDKAAEAMSHYFAEVE TAGLLI
Sequences:
>Translated_326_residues MGQVLASFDFPADDVALLAPCSPLAVAIFADRPYLRTEMAEDAAAAGLRVTRTAGLRALLEEPEQPLGDLVLVDCPVIES ADIAALARLDMRAARTGARLVVSTSMGSLDDVFGSLDQCDPQILVSPSRADRVIALGRLLTSDGARVRELSDHDRISLLR LTEQVAQIAQRLETLSSPGNGNQTVEAPAFGFGAESLRDEASRRLVRPARASLPDPRLVRKIIRQRQMRARFFEGDLFAD PAWDMLLDLTAARAEHKRVSVTSLCIASGVPPTTALRWIGQMTDCGLFARCEDDSDRRRAFISLSDKAAEAMSHYFAEVE TAGLLI >Mature_325_residues GQVLASFDFPADDVALLAPCSPLAVAIFADRPYLRTEMAEDAAAAGLRVTRTAGLRALLEEPEQPLGDLVLVDCPVIESA DIAALARLDMRAARTGARLVVSTSMGSLDDVFGSLDQCDPQILVSPSRADRVIALGRLLTSDGARVRELSDHDRISLLRL TEQVAQIAQRLETLSSPGNGNQTVEAPAFGFGAESLRDEASRRLVRPARASLPDPRLVRKIIRQRQMRARFFEGDLFADP AWDMLLDLTAARAEHKRVSVTSLCIASGVPPTTALRWIGQMTDCGLFARCEDDSDRRRAFISLSDKAAEAMSHYFAEVET AGLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35416; Mature: 35285
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVLASFDFPADDVALLAPCSPLAVAIFADRPYLRTEMAEDAAAAGLRVTRTAGLRALL CCCEEECCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEHHHHHHHHH EEPEQPLGDLVLVDCPVIESADIAALARLDMRAARTGARLVVSTSMGSLDDVFGSLDQCD HCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHCC PQILVSPSRADRVIALGRLLTSDGARVRELSDHDRISLLRLTEQVAQIAQRLETLSSPGN CCEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GNQTVEAPAFGFGAESLRDEASRRLVRPARASLPDPRLVRKIIRQRQMRARFFEGDLFAD CCCEEECCCCCCCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PAWDMLLDLTAARAEHKRVSVTSLCIASGVPPTTALRWIGQMTDCGLFARCEDDSDRRRA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHEE FISLSDKAAEAMSHYFAEVETAGLLI EEEECHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GQVLASFDFPADDVALLAPCSPLAVAIFADRPYLRTEMAEDAAAAGLRVTRTAGLRALL CCEEECCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEHHHHHHHHH EEPEQPLGDLVLVDCPVIESADIAALARLDMRAARTGARLVVSTSMGSLDDVFGSLDQCD HCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHCC PQILVSPSRADRVIALGRLLTSDGARVRELSDHDRISLLRLTEQVAQIAQRLETLSSPGN CCEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GNQTVEAPAFGFGAESLRDEASRRLVRPARASLPDPRLVRKIIRQRQMRARFFEGDLFAD CCCEEECCCCCCCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PAWDMLLDLTAARAEHKRVSVTSLCIASGVPPTTALRWIGQMTDCGLFARCEDDSDRRRA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHEE FISLSDKAAEAMSHYFAEVETAGLLI EEEECHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA