| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ilvE [H]
Identifier: 87200684
GI number: 87200684
Start: 2908711
End: 2909814
Strand: Direct
Name: ilvE [H]
Synonym: Saro_2671
Alternate gene names: 87200684
Gene position: 2908711-2909814 (Clockwise)
Preceding gene: 87200683
Following gene: 87200686
Centisome position: 81.67
GC content: 67.39
Gene sequence:
>1104_bases ATGGCGAGCACCGCCGACACCACTGGCCTCACCTTCACCCGCAATCCGCACCCGGCACCGGTTGCTGCGGACGCGCGTGC CCAGGTGCTGGCCAACCCCGGCTTCGGCACCACCTTCACCGATCACATGGTCGAGATCGACTACGCCGAGGGCCAGGGTT GGCACGATGCGCGCGTCGTCCCTTATGGCCCGATCGCGCTCGATCCGGCGGCCGCCGTCCTGCACTATGCGCAGGAAATC TTCGAAGGGCTCAAGGCCTACCGCCTTGCGGATGGCGGCATCGCGTTGTTCCGGCCCGAGGCGAATGCCCAGCGCTTCAA CGCTTCGGCCCGCCGCCTTGCCATGCCCGAGCTGCCGGAGGATCTTTTCGTCGAGGCCGTGCGCCAGCAGGTGCTGGCCG ACAAGGACTGGTTCCCCACGGTCGAAGGCGGATCGATGTACCTGCGCCCGTTCATGTTCGCGAGCGAGGCATTCCTCGGC GTTCGCCCTGCACGGCAGTACAAGTTCATGGTCATTGCCAGCCCGGCCGGCAACTACTTCAAGTCCGGCGCACCGGCCGT CTCGATCTGGGTGAGCGACTATACCCGCGCGGCGCCCGGCGGCACCGGCGCGGCCAAGTGCGGCGGCAACTACGCCGCCA GCCTCGTCCCCACGGCCGAGGCGTTTTCGCGCGGGCATGACCAGGTCCTGTTCCTCGACGCTGCCGAACACAAGTGGGTC GAGGAACTGGGGGGCATGAACCTGTTCTTCGTGTTCGACGACGGTTCGATCCTGACCCCGGAACTGACCGGCACGATCCT ACCCGGCATCACCCGTTCCAGCCTGCTCACGCTTGCAGCGGAAGAAGGCCTGACCGTGCGCGAAGGCCGCTACAGCCTCG ACCAGTGGAAGGCCGACGCCGCATCGGGCAAGCTCATCGAAACCTTTGCCTGCGGCACGGCGGCCGTCGTGACGCCCGTC GGCAAGGTCGCCAGCCGCGATGGCGAGTTCACCATCGGCTCGGGTGGCCCCGGCCAGCTGACCCAGAAGCTGCGCCAGAA GCTGGTAGGCATCCAGCGGGGCGAAATCGCCGATACCCACGGATGGGTCTCGCGCATCGCCTGA
Upstream 100 bases:
>100_bases ACCGACGCGGCCCTTCACATTTATTACATTCCCCTTGCCTTTCACGCAATAATAGTTCACGGCGCTGCATCTCTGATTCT AGCGCAAGGACTGCCTCCCC
Downstream 100 bases:
>100_bases TGCCCCTCTGCCAAAGGCACGAAAAAGCCCGCCGCTCCTCAGGGAACGGCGGGCTTTTCAATGCTTGCAATATCAGAAGT CGAACTGCGCGCGCATCCCG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MASTADTTGLTFTRNPHPAPVAADARAQVLANPGFGTTFTDHMVEIDYAEGQGWHDARVVPYGPIALDPAAAVLHYAQEI FEGLKAYRLADGGIALFRPEANAQRFNASARRLAMPELPEDLFVEAVRQQVLADKDWFPTVEGGSMYLRPFMFASEAFLG VRPARQYKFMVIASPAGNYFKSGAPAVSIWVSDYTRAAPGGTGAAKCGGNYAASLVPTAEAFSRGHDQVLFLDAAEHKWV EELGGMNLFFVFDDGSILTPELTGTILPGITRSSLLTLAAEEGLTVREGRYSLDQWKADAASGKLIETFACGTAAVVTPV GKVASRDGEFTIGSGGPGQLTQKLRQKLVGIQRGEIADTHGWVSRIA
Sequences:
>Translated_367_residues MASTADTTGLTFTRNPHPAPVAADARAQVLANPGFGTTFTDHMVEIDYAEGQGWHDARVVPYGPIALDPAAAVLHYAQEI FEGLKAYRLADGGIALFRPEANAQRFNASARRLAMPELPEDLFVEAVRQQVLADKDWFPTVEGGSMYLRPFMFASEAFLG VRPARQYKFMVIASPAGNYFKSGAPAVSIWVSDYTRAAPGGTGAAKCGGNYAASLVPTAEAFSRGHDQVLFLDAAEHKWV EELGGMNLFFVFDDGSILTPELTGTILPGITRSSLLTLAAEEGLTVREGRYSLDQWKADAASGKLIETFACGTAAVVTPV GKVASRDGEFTIGSGGPGQLTQKLRQKLVGIQRGEIADTHGWVSRIA >Mature_366_residues ASTADTTGLTFTRNPHPAPVAADARAQVLANPGFGTTFTDHMVEIDYAEGQGWHDARVVPYGPIALDPAAAVLHYAQEIF EGLKAYRLADGGIALFRPEANAQRFNASARRLAMPELPEDLFVEAVRQQVLADKDWFPTVEGGSMYLRPFMFASEAFLGV RPARQYKFMVIASPAGNYFKSGAPAVSIWVSDYTRAAPGGTGAAKCGGNYAASLVPTAEAFSRGHDQVLFLDAAEHKWVE ELGGMNLFFVFDDGSILTPELTGTILPGITRSSLLTLAAEEGLTVREGRYSLDQWKADAASGKLIETFACGTAAVVTPVG KVASRDGEFTIGSGGPGQLTQKLRQKLVGIQRGEIADTHGWVSRIA
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=332, Percent_Identity=38.2530120481928, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI296010906, Length=332, Percent_Identity=38.2530120481928, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI38176287, Length=332, Percent_Identity=38.2530120481928, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI50658084, Length=364, Percent_Identity=35.989010989011, Blast_Score=211, Evalue=7e-55, Organism=Homo sapiens, GI296010902, Length=332, Percent_Identity=33.1325301204819, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI296010900, Length=332, Percent_Identity=33.1325301204819, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI258614015, Length=295, Percent_Identity=36.271186440678, Blast_Score=168, Evalue=8e-42, Organism=Escherichia coli, GI48994963, Length=319, Percent_Identity=32.9153605015674, Blast_Score=139, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17568601, Length=346, Percent_Identity=36.9942196531792, Blast_Score=211, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17565728, Length=339, Percent_Identity=34.5132743362832, Blast_Score=186, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6322002, Length=375, Percent_Identity=37.0666666666667, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6322608, Length=346, Percent_Identity=37.5722543352601, Blast_Score=231, Evalue=1e-61, Organism=Drosophila melanogaster, GI24641779, Length=338, Percent_Identity=37.5739644970414, Blast_Score=219, Evalue=3e-57,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39274; Mature: 39143
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTADTTGLTFTRNPHPAPVAADARAQVLANPGFGTTFTDHMVEIDYAEGQGWHDARVV CCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEE PYGPIALDPAAAVLHYAQEIFEGLKAYRLADGGIALFRPEANAQRFNASARRLAMPELPE ECCCCEECHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCHHHHCCHHHHCCCCCCCH DLFVEAVRQQVLADKDWFPTVEGGSMYLRPFMFASEAFLGVRPARQYKFMVIASPAGNYF HHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH KSGAPAVSIWVSDYTRAAPGGTGAAKCGGNYAASLVPTAEAFSRGHDQVLFLDAAEHKWV HCCCCEEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCHHHHHCCCCEEEEEECHHHHHH EELGGMNLFFVFDDGSILTPELTGTILPGITRSSLLTLAAEEGLTVREGRYSLDQWKADA HHHCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHEEEHHCCCCEEECCCCCHHHHHCCC ASGKLIETFACGTAAVVTPVGKVASRDGEFTIGSGGPGQLTQKLRQKLVGIQRGEIADTH CCCCEEEECCCCCHHHHHCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCHH GWVSRIA HHHHHCC >Mature Secondary Structure ASTADTTGLTFTRNPHPAPVAADARAQVLANPGFGTTFTDHMVEIDYAEGQGWHDARVV CCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEE PYGPIALDPAAAVLHYAQEIFEGLKAYRLADGGIALFRPEANAQRFNASARRLAMPELPE ECCCCEECHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCHHHHCCHHHHCCCCCCCH DLFVEAVRQQVLADKDWFPTVEGGSMYLRPFMFASEAFLGVRPARQYKFMVIASPAGNYF HHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCHH KSGAPAVSIWVSDYTRAAPGGTGAAKCGGNYAASLVPTAEAFSRGHDQVLFLDAAEHKWV HCCCCEEEEEECCCCCCCCCCCCCHHCCCCEEEEECCCHHHHHCCCCEEEEEECHHHHHH EELGGMNLFFVFDDGSILTPELTGTILPGITRSSLLTLAAEEGLTVREGRYSLDQWKADA HHHCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHEEEHHCCCCEEECCCCCHHHHHCCC ASGKLIETFACGTAAVVTPVGKVASRDGEFTIGSGGPGQLTQKLRQKLVGIQRGEIADTH CCCCEEEECCCCCHHHHHCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCHH GWVSRIA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]