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The map label for this gene is ycgM [C]

Identifier: 87200611

GI number: 87200611

Start: 2806423

End: 2807313

Strand: Direct

Name: ycgM [C]

Synonym: Saro_2598

Alternate gene names: 87200611

Gene position: 2806423-2807313 (Clockwise)

Preceding gene: 87200609

Following gene: 87200612

Centisome position: 78.8

GC content: 63.97

Gene sequence:

>891_bases
ATGACCACCGAATACCGCCGCATCCTGCTTGATGGCTACCCGATCCTCACGACCCTTCAGGGCGGCGAGCTGGTGACGAG
GGACGGACGCAGCATCGGCGTCGACGAGGCGGTGCACCTTGCGCCCTGCAATCCGTCCAAGATCATCTGCGTCCATCTCA
ACTACCACAGCCGGGTGCAGGAGTTCATCACCAAGCTTCCGCCCGCGCCCACCTATTTCCAGAAACCGCTGACCGCGCTC
AACACCCACAAGGGCGCCATCGTGCGCCCCGAACGGTGCAAGTGGCTGAACTACGAAGGCGAGATCGCCATCGTCATCGG
CAAGACCTGCCGCAACATCTCGCCCGCCGAAGCCGGCGACTACATCCTCGGCTACTCGGTCGCCAACGACTATGGCCTGC
ACGACTTCCGCGATACCGACGCCGGCTCGATGCTGCGCGTGAAAGGCTCGGACACGCTCTGTCCGATCGGCCCCGGCCTC
GTCACCGGGTGGGACTTCCGCGACAAGATGATCCGGACCTATGTGAACGGCGTTCTCAAGCAGGAGGACAATACCAGCAA
CATGGAATGGGACATGCACTACCTGGTGGCCGACATCGCACGGACCATCACGCTGGAACCGGGCGATGTCCTGCTTTCAG
GCACGCCGGCCAACAGCCGCCCGGTGCAGATCGGCGACGTCGTGGAGGTCGAAGTGGACGGCCTTGGACGGCTGTCGAAC
ACCATCGTCCACGGCCCCACGCCAATCCGCGACGATTGCGGCGCCCAGCCGACCGAAAGCGAAGAGGTGATTTCCACCGC
GATGGGCGGAGACTGGGAATTCCGCGGCGTCCGCGCGGCTGGCGGCCAGGGTGCGGCCTTCTACGAATCCGCGCTCAACG
AGAAAAAGTAG

Upstream 100 bases:

>100_bases
AGTGGCGAAGCTTGGCCGCAACGGCCAAAGCCTGCGCGCCTTCCCCGCCCTATGATGCCGGCCAGACCAGTCGTTTCACG
ATCCCGATAGAGGCCCCGCC

Downstream 100 bases:

>100_bases
GGAGTAAAGCGCGGTGGCCGACGCAACGCGGTTCTACATCGGCGGCGAATGGGTCGCCCCTTCGACGAGCGTGACGACAG
ACATCGTCAATCCGGCGAAC

Product: 5-carboxymethyl-2-hydroxymuconate delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTTEYRRILLDGYPILTTLQGGELVTRDGRSIGVDEAVHLAPCNPSKIICVHLNYHSRVQEFITKLPPAPTYFQKPLTAL
NTHKGAIVRPERCKWLNYEGEIAIVIGKTCRNISPAEAGDYILGYSVANDYGLHDFRDTDAGSMLRVKGSDTLCPIGPGL
VTGWDFRDKMIRTYVNGVLKQEDNTSNMEWDMHYLVADIARTITLEPGDVLLSGTPANSRPVQIGDVVEVEVDGLGRLSN
TIVHGPTPIRDDCGAQPTESEEVISTAMGGDWEFRGVRAAGGQGAAFYESALNEKK

Sequences:

>Translated_296_residues
MTTEYRRILLDGYPILTTLQGGELVTRDGRSIGVDEAVHLAPCNPSKIICVHLNYHSRVQEFITKLPPAPTYFQKPLTAL
NTHKGAIVRPERCKWLNYEGEIAIVIGKTCRNISPAEAGDYILGYSVANDYGLHDFRDTDAGSMLRVKGSDTLCPIGPGL
VTGWDFRDKMIRTYVNGVLKQEDNTSNMEWDMHYLVADIARTITLEPGDVLLSGTPANSRPVQIGDVVEVEVDGLGRLSN
TIVHGPTPIRDDCGAQPTESEEVISTAMGGDWEFRGVRAAGGQGAAFYESALNEKK
>Mature_295_residues
TTEYRRILLDGYPILTTLQGGELVTRDGRSIGVDEAVHLAPCNPSKIICVHLNYHSRVQEFITKLPPAPTYFQKPLTALN
THKGAIVRPERCKWLNYEGEIAIVIGKTCRNISPAEAGDYILGYSVANDYGLHDFRDTDAGSMLRVKGSDTLCPIGPGLV
TGWDFRDKMIRTYVNGVLKQEDNTSNMEWDMHYLVADIARTITLEPGDVLLSGTPANSRPVQIGDVVEVEVDGLGRLSNT
IVHGPTPIRDDCGAQPTESEEVISTAMGGDWEFRGVRAAGGQGAAFYESALNEKK

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=221, Percent_Identity=33.0316742081448, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI40786394, Length=221, Percent_Identity=33.0316742081448, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI215422413, Length=209, Percent_Identity=32.0574162679426, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI66348062, Length=194, Percent_Identity=32.9896907216495, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=31.8407960199005, Blast_Score=102, Evalue=5e-22,
Organism=Escherichia coli, GI1787428, Length=196, Percent_Identity=32.1428571428571, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17557057, Length=190, Percent_Identity=35.7894736842105, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324161, Length=225, Percent_Identity=28, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28572127, Length=223, Percent_Identity=35.8744394618834, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24663695, Length=212, Percent_Identity=31.6037735849057, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI28571789, Length=204, Percent_Identity=31.3725490196078, Blast_Score=85, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 32437; Mature: 32306

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEYRRILLDGYPILTTLQGGELVTRDGRSIGVDEAVHLAPCNPSKIICVHLNYHSRVQ
CCCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECHHHHHH
EFITKLPPAPTYFQKPLTALNTHKGAIVRPERCKWLNYEGEIAIVIGKTCRNISPAEAGD
HHHHHCCCCCCHHHCCHHHHCCCCCCEECHHHCCEECCCCCEEEEECCCCCCCCCCCCCC
YILGYSVANDYGLHDFRDTDAGSMLRVKGSDTLCPIGPGLVTGWDFRDKMIRTYVNGVLK
EEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHC
QEDNTSNMEWDMHYLVADIARTITLEPGDVLLSGTPANSRPVQIGDVVEVEVDGLGRLSN
CCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCEEECCEEEEEECCCCCCCC
TIVHGPTPIRDDCGAQPTESEEVISTAMGGDWEFRGVRAAGGQGAAFYESALNEKK
EEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
TTEYRRILLDGYPILTTLQGGELVTRDGRSIGVDEAVHLAPCNPSKIICVHLNYHSRVQ
CCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECHHHHHH
EFITKLPPAPTYFQKPLTALNTHKGAIVRPERCKWLNYEGEIAIVIGKTCRNISPAEAGD
HHHHHCCCCCCHHHCCHHHHCCCCCCEECHHHCCEECCCCCEEEEECCCCCCCCCCCCCC
YILGYSVANDYGLHDFRDTDAGSMLRVKGSDTLCPIGPGLVTGWDFRDKMIRTYVNGVLK
EEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHC
QEDNTSNMEWDMHYLVADIARTITLEPGDVLLSGTPANSRPVQIGDVVEVEVDGLGRLSN
CCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCEEECCEEEEEECCCCCCCC
TIVHGPTPIRDDCGAQPTESEEVISTAMGGDWEFRGVRAAGGQGAAFYESALNEKK
EEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]